RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SEMA5BQ9P283 1151 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 MARCH4Q9P2E8 410 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 ASIC3Q9UHC3 531 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 LNPEPQ9UIQ6 1025 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 TMEM184BQ9Y519 407 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 PCDHGA4Q9Y5G9 962 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 CTAGE9A4FU28 777 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 IQCF5A8MTL0 148 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 GOLGA8KD6RF30 607 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 GOLGA8TH3BQL2 631 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 TK2O00142 265 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 BTN3A3O00478 584 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 BTN3A1O00481 513 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SPAG6O75602 509 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 TMEM63AO94886 807 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 MT-ND3P03897 115 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 EBLN1P0CF75 366 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 FGF5P12034 268 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 LIFP15018 202 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 ACADLP28330 430 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 PRDX3P30048 256 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 CCR7P32248 378 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SHMT2P34897 504 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 KPNA2P52292 529 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 ABHD18Q0P651 414 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 THOC5Q13769 683 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 MAP7Q14244 749 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
RFFL-204ENST00000414419 DNAJC21Q5F1R6 531 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 KIAA0930Q6ICG6 404 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 TTC23LQ6PF05 361 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 C6orf15Q6UXA7 325 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 OTOAQ7RTW8 1153 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 PCGF5Q86SE9 256 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 CAND1Q86VP6 1230 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 PPIL6Q8IXY8 311 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SLC22A15Q8IZD6 547 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 KRT222Q8N1A0 295 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 D2HGDHQ8N465 521 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 CFAP61Q8NHU2 1237 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SKA2Q8WVK7 121 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 ZNF669Q96BR6 464 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 WBP1Q96G27 269 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SERPINB12Q96P63 405 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 BBC3Q96PG8 261 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 NAPGQ99747 312 aaPredicted RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 DDX47Q9H0S4 455 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 XKR8Q9H6D3 395 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 FANCEQ9HB96 536 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 FGF21Q9NSA1 209 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 POMT2Q9UKY4 750 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 NEU2Q9Y3R4 380 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SAR1BQ9Y6B6 198 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 MAD1L1Q9Y6D9 718 aa10.88□□□□□ -0.67
RFFL-204ENST00000414419 SNRNP200O75643 2136 aaKnown RBP10.88□□□□□ -0.67
RFFL-204ENST00000414419 FAM237BA0A1B0GVD1 139 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 PIPSLA2A3N6 862 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 SLC9B1P1A6NJY1 282 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 ZNF891A8MT65 544 aaPredicted RBP10.87□□□□□ -0.67
RFFL-204ENST00000414419 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
RFFL-204ENST00000414419 H3BMM5 538 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 GPC4O75487 556 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 FOLR1P15328 257 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 CHRM3P20309 590 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 OGNP20774 298 aaKnown RBP10.87□□□□□ -0.67
RFFL-204ENST00000414419 RPS3P23396 243 aaKnown RBP eCLIP10.87□□□□□ -0.67
RFFL-204ENST00000414419 AOAHP28039 575 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 FMO4P31512 558 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 TUBB4BP68371 445 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 ABRQ12979 859 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 TUBB2AQ13885 445 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 KCNAB1Q14722 419 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 FBXO38Q6PIJ6 1188 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 UNC5AQ6ZN44 842 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 TIPARPQ7Z3E1 657 aaKnown RBP10.87□□□□□ -0.67
RFFL-204ENST00000414419 GALNT6Q8NCL4 622 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 OR8K5Q8NH50 307 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 LKAAEAR1Q8TD35 194 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 N4BP2L2Q92802 583 aaPredicted RBP10.87□□□□□ -0.67
RFFL-204ENST00000414419 RNF31Q96EP0 1072 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 RUNDC3BQ96NL0 473 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 FCRL4Q96PJ5 515 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 TUBB2BQ9BVA1 445 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 P2RY12Q9H244 342 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 KCND1Q9NSA2 647 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 ACTR10Q9NZ32 417 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 OR6C2Q9NZP2 312 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 ICKQ9UPZ9 632 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 CRYL1Q9Y2S2 319 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 MRFAP1Q9Y605 127 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 RPS6KL1Q9Y6S9 549 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 SEC16AO15027 2179 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 LOC400499M0QZD8 3231 aa10.87□□□□□ -0.67
RFFL-204ENST00000414419 LOC101059948A0A1B0GTJ6 334 aa10.86□□□□□ -0.67
RFFL-204ENST00000414419 ISM1B1AKI9 464 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms