RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 OR4E2Q8NGC2 313 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 OR52E1Q8NGJ3 308 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 MDM1Q8TC05 714 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 ZDHHC12Q96GR4 267 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 C9orf72Q96LT7 481 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 TGM7Q96PF1 710 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 CNTNAP3Q9BZ76 1288 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 SRMSQ9H3Y6 488 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 TFB2MQ9H5Q4 396 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 GALPQ9UBC7 116 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 EPHA6Q9UF33 1036 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 LOXL2Q9Y4K0 774 aa13.11□□□□□ -0.31
SNCAIP-206ENST00000414317 OR6C74A6NCV1 312 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 OR5K3A6NET4 321 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 KDM1AO60341 852 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 BRINP1O60477 761 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 VPS26AO75436 327 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 GSTA2P09210 222 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 JMJD7P0C870 316 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 ATP5DP30049 168 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 CSTF2P33240 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 GBX1Q14549 363 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 IRGCQ6NXR0 463 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 ARHGAP22Q7Z5H3 698 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 SIDT2Q8NBJ9 832 aaKnown RBP13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 AGBL5Q8NDL9 886 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 NDNQ99608 321 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 GPR21Q99679 349 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 L2HGDHQ9H9P8 463 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 KLHL42Q9P2K6 505 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 TDRKHQ9Y2W6 561 aaKnown RBP13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 MED16Q9Y2X0 877 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
SNCAIP-206ENST00000414317 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 ZNF500O60304 480 aaPredicted RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 HGFP14210 728 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 RBMS1P29558 406 aaKnown RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 SHMT2P34897 504 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 PRKAA1Q13131 559 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 ACSBG2Q5FVE4 666 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 TTC23LQ6PF05 361 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 SLC26A11Q86WA9 606 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 AMIGO1Q86WK6 493 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 CDKL2Q92772 493 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 PRR11Q96HE9 360 aaPredicted RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 SLC30A3Q99726 388 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 TAS2R13Q9NYV9 303 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 CORO1CQ9ULV4 474 aaPredicted RBP13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 DMXL2Q8TDJ6 3036 aa13.09□□□□□ -0.31
SNCAIP-206ENST00000414317 TCRBV9S1A1TA0A576 114 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 MATN2O00339 956 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 TOX3O15405 576 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 RASSF9O75901 435 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 TNFSF15O95150 251 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CAPNS1P04632 268 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 POLR2CP19387 275 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 ABCG1P45844 678 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 GPX6P59796 221 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 PPP1CAP62136 330 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CUL1Q13616 776 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 KLHL38Q2WGJ6 581 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 RBM20Q5T481 1227 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CACHD1Q5VU97 1274 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CYS1Q717R9 158 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 KDF1Q8NAX2 398 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 GIMAP7Q8NHV1 300 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CD200R1Q8TD46 325 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 SLC46A1Q96NT5 459 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 CD180Q99467 661 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 FMO2Q99518 471 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 XKR8Q9H6D3 395 aa13.08□□□□□ -0.32
SNCAIP-206ENST00000414317 LRRC4CQ9HCJ2 640 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms