RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 TLR8Q9NR97 1041 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 ZNF490Q9ULM2 529 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GABARAPO95166 117 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 DHFRP00374 187 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 ZNF7P17097 686 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 AQP1P29972 269 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 OR1E1P30953 314 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 DSC2Q02487 901 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 CPSF6Q16630 551 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 C10orf120Q5SQS8 335 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 CYP4Z1Q86W10 505 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 AMIGO1Q86WK6 493 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 CILP2Q8IUL8 1156 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 HS3ST5Q8IZT8 346 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 STK40Q8N2I9 435 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 CDK15Q96Q40 435 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GPR20Q99678 358 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 DOK1Q99704 481 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SPATC1LQ9H0A9 340 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 MRM3Q9HC36 420 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 ABCC13Q9NSE7 274 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SARDHQ9UL12 918 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GNG14A0A1W2PPG7 69 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 DCLK1O15075 740 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GGT1P19440 569 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 EFEMP1Q12805 493 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SELENBP1Q13228 472 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GRIK4Q16099 956 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SPDYE7PQ495Y7 208 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 C6orf136Q5SQH8 315 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 STEAP3Q658P3 488 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 PAQR3Q6TCH7 311 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 PLEKHM3Q6ZWE6 761 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 PRSS48Q7RTY5 328 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 GALNT6Q8NCL4 622 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 HSPE1-MOB4S4R3N1 261 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
CLTCL1-201ENST00000412649 LCKP06239 509 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 SDC2P34741 201 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 TBX4P57082 545 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 DAOAP59103 153 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ABATP80404 500 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 IL18Q14116 193 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 L3HYPDHQ96EM0 354 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 C3orf30Q96M34 536 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 KCNC2Q96PR1 638 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 MED28Q9H204 178 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 PER2O15055 1255 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 NBNO60934 754 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 B3GAT3O94766 335 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 CSF2P04141 144 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 KCNA5P22460 613 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ACLYP53396 1101 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 TSTQ16762 297 aaKnown RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ZSWIM7Q19AV6 140 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 BRMS1LQ5PSV4 323 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 IQCF2Q8IXL9 164 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 MED30Q96HR3 178 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 LRRC14BA6NHZ5 514 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 DIRAS1O95057 198 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 PTPRAP18433 802 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ITGALP20701 1170 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 GADD45AP24522 165 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ERP29P30040 261 aaKnown RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 LACC1Q8IV20 430 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 CADM2Q8N3J6 435 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ZNF675Q8TD23 568 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 C1GALT1C1Q96EU7 318 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 IL12RB2Q99665 862 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 ATP6V1HQ9UI12 483 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 SNX6Q9UNH7 406 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 RWDD3Q9Y3V2 267 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 DFNA5O60443 496 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 CYP3A5P20815 502 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 CRATP43155 626 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 KIR3DL1P43629 444 aa13.65□□□□□ -0.22
CLTCL1-201ENST00000412649 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms