RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 TBC1D1Q86TI0 1168 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 CATSPERDQ86XM0 798 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 KIRREL3Q8IZU9 778 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 EID3Q8N140 333 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 VANGL1Q8TAA9 524 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 RNF128Q8TEB7 428 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 CHPT1Q8WUD6 406 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARHGAP45Q92619 1136 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZUFSPQ96AP4 578 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM218AQ96MZ4 157 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 USP28Q96RU2 1077 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TDRD1Q9BXT4 1180 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 RTN4RQ9BZR6 473 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 VN1R1Q9GZP7 353 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 WWTR1Q9GZV5 400 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 SLITRK2Q9H156 845 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 PPIL3Q9H2H8 161 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARRDC1-AS1Q9H2J1 176 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 RRN3Q9NYV6 651 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 FLRT3Q9NZU0 649 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 THAP10Q9P2Z0 257 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 UBA2Q9UBT2 640 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF107Q9UII5 783 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TUBE1Q9UJT0 475 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 DBNLQ9UJU6 430 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 MTUS1Q9ULD2 1270 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 LYVE1Q9Y5Y7 322 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 RUSC2Q8N2Y8 1516 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 ELOVL7A1L3X0 281 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF840PA6NDX5 716 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 RRN3P2A6NIE6 340 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 TTC36A6NLP5 189 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 HEPACAM2A8MVW5 462 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 KLF11O14901 512 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 OGG1O15527 345 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 PRKRAO75569 313 aaKnown RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 HOXD4P09016 255 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 SPARCP09486 303 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 DPCR1Q3MIW9 517 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 MDH1BQ5I0G3 518 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ADALQ6DHV7 355 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 INO80CQ6PI98 192 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 CFAP77Q6ZQR2 320 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 GSTA5Q7RTV2 222 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 KCNMB4Q86W47 210 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 FGFRL1Q8N441 504 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 NGEFQ8N5V2 710 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 OR5M8Q8NGP6 311 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 TRPC4APQ8TEL6 797 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 RFT1Q96AA3 541 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ERLEC1Q96DZ1 483 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 CNRIP1Q96F85 164 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 NSL1Q96IY1 281 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 SGK494Q96LW2 274 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 C10orf90Q96M02 699 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 RPS6KC1Q96S38 1066 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 MAP7D2Q96T17 732 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 MAN2C1Q9NTJ4 1040 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF701Q9NV72 531 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZHX1Q9UKY1 873 aaPredicted RBP1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 PNMA2Q9UL42 364 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 ARHGAP26Q9UNA1 814 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 PCDHGA5Q9Y5G8 931 aa1.13□□□□□ -2.23
RNU2-55P-201ENST00000411146 IGKV6D-21A0A0A0MT36 114 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 A0A1W2PQ72 361 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 A0A1W2PR77 199 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 GLTPD2A6NH11 291 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 GAPDHSO14556 408 aaPredicted RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 HCRTR2O43614 444 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 IPO7O95373 1038 aaKnown RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 RARGP13631 454 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ATP1A3P13637 1013 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF19P17023 458 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 SUOXP51687 545 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 VAMP2P63027 116 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 PLA2G7Q13093 441 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 EIF4A2Q14240 407 aaKnown RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 HERC3Q15034 1050 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ADIPOQQ15848 244 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 CCNG2Q16589 344 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 GRAMD1BQ3KR37 738 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ITPRIPL2Q3MIP1 535 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 WLSQ5T9L3 541 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 KIAA0930Q6ICG6 404 aaPredicted RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ACAD10Q6JQN1 1059 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 FIP1L1Q6UN15 594 aaKnown RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 R3HCC1LQ7Z5L2 792 aaKnown RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 RTN4RL2Q86UN3 420 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ANKRD18AQ8IVF6 992 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZC3H3Q8IXZ2 948 aaKnown RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 RNF168Q8IYW5 571 aaPredicted RBP1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 CEP57L1Q8IYX8 460 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 LSMEM2Q8N112 164 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 C11orf42Q8N5U0 333 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 ESX1Q8N693 406 aa1.12□□□□□ -2.23
RNU2-55P-201ENST00000411146 CCDC185Q8N715 623 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms