RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 EPC2Q52LR7 807 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 HERC4Q5GLZ8 1057 aaPredicted RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 LRRC38Q5VT99 294 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ANKRD54Q6NXT1 300 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 KCNV1Q6PIU1 500 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CCBE1Q6UXH8 406 aaPredicted RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 MACC1Q6ZN28 852 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 MEPCEQ7L2J0 689 aaKnown RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 SLC29A4Q7RTT9 530 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 AQP12AQ8IXF9 295 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 KLHDC8AQ8IYD2 350 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SLC25A41Q8N5S1 370 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ANKRD13CQ8N6S4 541 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ZNF419Q96HQ0 510 aaPredicted RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 CDKN2AIPNLQ96HQ2 116 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CLMNQ96JQ2 1002 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 COQ10AQ96MF6 247 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 OR6C1Q96RD1 312 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ZNF577Q9BSK1 485 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 LHPPQ9H008 270 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 DDX47Q9H0S4 455 aaKnown RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 CARD9Q9H257 536 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 MLXIPLQ9NP71 852 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 MYNNQ9NPC7 610 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 RNF146Q9NTX7 359 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SLC9A2Q9UBY0 812 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 DNPEPQ9ULA0 475 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 EXOC6BQ9Y2D4 811 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 NME7Q9Y5B8 376 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SNX9Q9Y5X1 595 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 UBE4BO95155 1302 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 A0A087X1B8 175 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 DENND3A2RUS2 1198 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 TMEM221A6NGB7 291 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 HEPACAM2A8MVW5 462 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 TLR4O00206 839 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 SLC16A5O15375 505 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 CLDN3O15551 220 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 XRCC3O43542 346 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 GMFGO60234 142 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ZNF217O75362 1048 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 SPAG6O75602 509 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 CLDN7O95471 211 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 PLGP00747 810 aaPredicted RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 PLAUP00749 431 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 C9P02748 559 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 WNT1P04628 370 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 KRT8P05787 483 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 OR2T7P0C7T2 308 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 IER3P46695 156 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 NPBWR1P48145 328 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 LHX1P48742 406 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 SMSP52788 366 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 CACNA2D1P54289 1103 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 MFAP3P55082 362 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 HOXA4Q00056 320 aaPredicted RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 RUNX1T1Q06455 604 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ARHGAP1Q07960 439 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 MAD2L1Q13257 205 aaPredicted RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 RAPSNQ13702 412 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 NEDD9Q14511 834 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 PTPAQ15257 358 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ABHD17BQ5VST6 288 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ALS2CLQ60I27 953 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 CENPPQ6IPU0 288 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 CYB5D1Q6P9G0 228 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 SLC36A4Q6YBV0 504 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 NRARPQ7Z6K4 114 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 TAF8Q7Z7C8 310 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ADAMTSL2Q86TH1 951 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 GPR180Q86V85 440 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 AMZ2Q86W34 360 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 VRK3Q8IV63 474 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 BANPQ8N9N5 519 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 LRRC57Q8N9N7 239 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 OR2AJ1Q8NGZ0 328 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 APBB2Q92870 758 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ERGIC1Q969X5 290 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 TUBGCP3Q96CW5 907 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 PRMT6Q96LA8 375 aaPredicted RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 SLC22A12Q96S37 553 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 GFI1Q99684 422 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 FAM213AQ9BRX8 229 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ECT2Q9H8V3 914 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 RPF1Q9H9Y2 349 aaKnown RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 TMOD3Q9NYL9 352 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 ABT1Q9ULW3 272 aaKnown RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 NAP1L2Q9ULW6 460 aaPredicted RBP4.76□□□□□ -1.65
LSM5-205ENST00000409952 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 PADI2Q9Y2J8 665 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 GRIP1Q9Y3R0 1128 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms