RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MANBAO00462 879 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 SLC16A5O15375 505 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 CLDN9O95484 217 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 NPPAP01160 153 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 HIST1H2AGP0C0S8 130 aaPredicted RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 SLC2A4P14672 509 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 HIST1H2ADP20671 130 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 JAK1P23458 1154 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 SP140Q13342 867 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 MED21Q13503 144 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 HABP4Q5JVS0 413 aaKnown RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 IRAK1BP1Q5VVH5 260 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 NEK10Q6ZWH5 1172 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 LRRC70Q7Z2Q7 622 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 HOMEZQ8IX15 550 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 DPP10Q8N608 796 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 HIST1H2AHQ96KK5 128 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 UHRF1Q96T88 793 aaPredicted RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 HIST1H2AJQ99878 128 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 H2AFJQ9BTM1 129 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 SLC29A3Q9BZD2 475 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 VCXQ9H320 206 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 DLGAP2Q9P1A6 1054 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 ZNF490Q9ULM2 529 aaPredicted RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 C5orf42Q9H799 3197 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 DPPA5A6NC42 116 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 GRXCR1A8MXD5 290 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 LYNP07948 512 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 UBTFL6P0CB48 400 aaPredicted RBP19.67■□□□□ 0.74
USP39-204ENST00000409766 GRIA3P42263 894 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 SLC6A12P48065 614 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 HNMTP50135 292 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 ST8SIA6P61647 398 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 RPL38P63173 70 aaKnown RBP19.67■□□□□ 0.74
USP39-204ENST00000409766 RABL3Q5HYI8 236 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 TMC5Q6UXY8 1006 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 LIPIQ6XZB0 460 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 PARS2Q7L3T8 475 aaKnown RBP19.67■□□□□ 0.74
USP39-204ENST00000409766 RASGRP3Q8IV61 690 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 BEND7Q8N7W2 519 aaPredicted RBP19.67■□□□□ 0.74
USP39-204ENST00000409766 BTN2A2Q8WVV5 523 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 ELMO1Q92556 727 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 P2RY13Q9BPV8 354 aa19.67■□□□□ 0.74
USP39-204ENST00000409766 AQP12BA6NM10 295 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 PRRT4C9JH25 899 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 RSL1D1O76021 490 aaKnown RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 SLCO2B1O94956 709 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 CA3P07451 260 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 HMGCS1Q01581 520 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 FOLH1Q04609 750 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 GRIN2CQ14957 1233 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ZNF284Q2VY69 593 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ZNF648Q5T619 568 aaPredicted RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 LCN8Q6JVE9 175 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 AQP12AQ8IXF9 295 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ASZ1Q8WWH4 475 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 NXPE3Q969Y0 559 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 VPS35Q96QK1 796 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 FAM83CQ9BQN1 747 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 INTS7Q9NVH2 962 aaKnown RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 ACTR3BQ9P1U1 418 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 EGFL7Q9UHF1 273 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 OR2AG2A6NM03 316 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ARNTLO00327 626 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 IFRD1O00458 451 aaPredicted RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 FTH1P02794 183 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ELFN1P0C7U0 828 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 CASP2P42575 452 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 GNPDA1P46926 289 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 MAD2L1Q13257 205 aaPredicted RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 GPM6BQ13491 265 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 FAM78AQ5JUQ0 283 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 NANOGP8Q6NSW7 305 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ERAP2Q6P179 960 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 SLC2A7Q6PXP3 512 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 RGL4Q8IZJ4 473 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 LRTOMTQ8WZ04 291 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ZFYVE19Q96K21 471 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ALG2Q9H553 416 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ACTR8Q9H981 624 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 NANOGQ9H9S0 305 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 ZNHIT2Q9UHR6 403 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 EIF3LQ9Y262 564 aaKnown RBP19.66■□□□□ 0.74
USP39-204ENST00000409766 C2orf16Q68DN1 1984 aa19.66■□□□□ 0.74
USP39-204ENST00000409766 OTOL1A6NHN0 477 aaPredicted RBP19.65■□□□□ 0.74
USP39-204ENST00000409766 ZNF839A8K0R7 811 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 CYP2A7P20853 494 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 GSK3BP49841 420 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 AP1S2P56377 157 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 KIAA0040Q15053 153 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 AAK1Q2M2I8 961 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 GAB4Q2WGN9 574 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 PTCHD3Q3KNS1 767 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 SGO1Q5FBB7 561 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 LDLRAP1Q5SW96 308 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 FBXL19Q6PCT2 694 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 DLEU7Q6UYE1 221 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 MCOLN3Q8TDD5 553 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 BPIFB1Q8TDL5 484 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms