RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ASB12Q8WXK4 309 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 CCDC28BQ9BUN5 200 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 KLC4Q9NSK0 619 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 OPTCQ9UBM4 332 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 SLC23A2Q9UGH3 650 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 FBXL21Q9UKT6 434 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 TRIOO75962 3097 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 GPR89AB7ZAQ6 455 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 K7EPI3 171 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 OR4F21O95013 312 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 GPR89BP0CG08 455 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 GGT5P36269 586 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 SLC6A12P48065 614 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 PKNOX1P55347 436 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 AP1S2P56377 157 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CORO7P57737 925 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 STARD6P59095 220 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 ACTN3Q08043 901 aaPredicted RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TRAF3Q13114 568 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MCOLN3Q8TDD5 553 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 HHIPQ96QV1 700 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TUBB1Q9H4B7 451 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 WNT16Q9UBV4 365 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CIDEBQ9UHD4 219 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CA5BQ9Y2D0 317 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TIMM22Q9Y584 194 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 C10orf142B7Z368 130 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 KMOO15229 486 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CRCPO75575 148 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 STK16O75716 305 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 SEMA4FO95754 770 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 IGLV3-19P01714 112 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CATP04040 527 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 FUCA1P04066 466 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CEACAM5P06731 702 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MAP4P27816 1152 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MAPK9P45984 424 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 HNMTP50135 292 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CLDN2P57739 230 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 HABP4Q5JVS0 413 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TMEM198Q66K66 360 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 LRRC70Q7Z2Q7 622 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 AMZ2Q86W34 360 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 SIX5Q8N196 739 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 DENND6BQ8NEG7 585 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MAFAQ8NHW3 353 aaPredicted RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 FBXL8Q96CD0 374 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 PTCD3Q96EY7 689 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MARK4Q96L34 752 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 C3orf30Q96M34 536 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 FOPNLQ96NB1 174 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 DPEP2Q9H4A9 486 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 IPPKQ9H8X2 491 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 ZNHIT2Q9UHR6 403 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 TRIM33Q9UPN9 1127 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 BTRCQ9Y297 605 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 SLC17A4Q9Y2C5 497 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
GPNMB-203ENST00000409458 ANGPTL3Q9Y5C1 460 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
GPNMB-203ENST00000409458 POM121BA6NF01 834 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 CACNB4O00305 520 aaPredicted RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 GIPC1O14908 333 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 WDR47O94967 919 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 C1orf105O95561 183 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 ENO1P06733 434 aaKnown RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 UROSP10746 265 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 EPORP19235 508 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 ARL1P40616 181 aaPredicted RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 CCNG1P51959 295 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 PLOD1Q02809 727 aaPredicted RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 PTCHD3Q3KNS1 767 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 TCHHL1Q5QJ38 904 aaPredicted RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 METTL21CQ5VZV1 264 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 CDYL2Q8N8U2 506 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 TSTD1Q8NFU3 115 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 ACTRT2Q8TDY3 377 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 CATSPER2Q96P56 530 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 PKP4Q99569 1192 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms