RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 NENFQ9UMX5 172 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF451Q9Y4E5 1061 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TRPM3Q9HCF6 1732 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF840PA6NDX5 716 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PRR33A8MZF0 331 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CCRL2O00421 344 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 LATS1O95835 1130 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TPBGLP0DKB5 382 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ADRA1BP35368 520 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CLCN4P51793 760 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CLCNKAP51800 687 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 IL18R1Q13478 541 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TRIP6Q15654 476 aaKnown RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PDCD4Q53EL6 469 aaKnown RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ARSHQ5FYA8 562 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 XKR6Q5GH73 641 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 MS4A13Q5J8X5 152 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 AADACL4Q5VUY2 407 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 FAM160A2Q8N612 972 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CAMKVQ8NCB2 501 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PJA1Q8NG27 643 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF671Q8TAW3 534 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CPT1BQ92523 772 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 AP3S1Q92572 193 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TCEAL4Q96EI5 215 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 C9orf16Q9BUW7 83 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF717Q9BY31 904 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 THAP2Q9H0W7 228 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 KCNK13Q9HB14 408 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF232Q9UNY5 417 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 SAGE2PA6NJ88 616 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 A8MUA0 341 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PLOD3O60568 738 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 SUPT7LO94864 414 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF12P17014 697 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ITIH2P19823 946 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 F8A1P23610 371 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 MAGEA8P43361 318 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 MAGEA12P43365 314 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF132P52740 706 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CTBP2P56545 445 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CACNG1Q06432 222 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TBCELQ5QJ74 424 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 GARNL3Q5VVW2 1013 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CDCA2Q69YH5 1023 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 RHBDF2Q6PJF5 856 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF574Q6ZN55 896 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TMEM26Q6ZUK4 368 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 MEIOBQ8N635 442 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 DCAF4L2Q8NA75 395 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PLA2G15Q8NCC3 412 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 OR4E2Q8NGC2 313 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PHB2Q99623 299 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 CCDC177Q9NQR7 707 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 GRID1Q9ULK0 1009 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 THSD7AQ9UPZ6 1657 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 MBLAC1A4D2B0 266 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 GRID2O43424 1007 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PRKACAP17612 351 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ATP5A1P25705 553 aaKnown RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ELK3P41970 407 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 RCAN2Q14206 197 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PRAMEF14Q5SWL7 426 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 STXBP5Q5T5C0 1151 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 DUS1LQ6P1R4 473 aaKnown RBP7.18□□□□□ -1.26
SCN9A-202ENST00000409435 GPSM1Q86YR5 675 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 OR8H3Q8N146 312 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 C4orf33Q8N1A6 199 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 DHRSXQ8N5I4 330 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ATG16L2Q8NAA4 619 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 ATP6V1C2Q8NEY4 427 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 BBS1Q8NFJ9 593 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 TSPAN14Q8NG11 270 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PDLIM2Q96JY6 352 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 BCL2L14Q9BZR8 327 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 NMRAL1Q9HBL8 299 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 GDAP2Q9NXN4 497 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 PCDHGC4Q9Y5F7 938 aa7.18□□□□□ -1.26
SCN9A-202ENST00000409435 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ERAL1O75616 437 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NTRK1P04629 796 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TSHRP16473 764 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NFKB1P19838 968 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PTPN6P29350 595 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CDK7P50613 346 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RACK1P63244 317 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 XIAPP98170 497 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 VAC14Q08AM6 782 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 MYBPHQ13203 477 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PKP1Q13835 747 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 GPR153Q6NV75 609 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CLEC20AQ6ZU45 233 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 MILR1Q7Z6M3 343 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ADGRD2Q7Z7M1 963 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SIAH1Q8IUQ4 282 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OR4K17Q8NGC6 315 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SNRNP25Q9BV90 132 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 DSN1Q9H410 356 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms