RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PTGIRP43119 386 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 MARCKSL1P49006 195 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 PRLHRP49683 370 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ABRQ12979 859 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 MSLNQ13421 630 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 OLIG2Q13516 323 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 PRPSAP1Q14558 356 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ANKRD20A2Q5SQ80 823 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 CCDC181Q5TID7 509 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ANKRD20A1Q5TYW2 823 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ANKRD20A3Q5VUR7 823 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 CNGA4Q8IV77 575 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 NXPE1Q8N323 547 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ENDOVQ8N8Q3 282 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 OR13C4Q8NGS5 318 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 OR1L3Q8NH93 324 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 HEXDCQ8WVB3 486 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 LCN9Q8WX39 176 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 CLIP3Q96DZ5 547 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 POM121Q96HA1 1249 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 COPS8Q99627 209 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 C19orf43Q9BQ61 176 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 APOL2Q9BQE5 337 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 FERMT1Q9BQL6 677 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 TLR10Q9BXR5 811 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 FAM96AQ9H5X1 160 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 CUEDC1Q9NWM3 386 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 CRLS1Q9UJA2 301 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ERRFI1Q9UJM3 462 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 SERTAD3Q9UJW9 196 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 TCFL5Q9UL49 500 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 SNX7Q9UNH6 387 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 AAR2Q9Y312 384 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 MAP4K5Q9Y4K4 846 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 PCDHGB7Q9Y5F8 929 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 DNHD1Q96M86 4753 aa8.9□□□□□ -0.98
NIF3L1-203ENST00000409129 GSAPA4D1B5 854 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 TMEM150CB9EJG8 249 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 BTN3A3O00478 584 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 SORBS2O94875 1100 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 TMEM63AO94886 807 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 CAPN1P07384 714 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ST6GAL1P15907 406 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ITGALP20701 1170 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 CYP2A7P20853 494 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 PSMB4P28070 264 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 HADHAP40939 763 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 PREPP48147 710 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 CD151P48509 253 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 VAV2P52735 878 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 TMPRSS15P98073 1019 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 TBX2Q13207 712 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 GPR33Q49SQ1 333 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ZNF789Q5FWF6 425 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 FAM69BQ5VUD6 431 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 C11orf63Q6NUN7 778 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 SNX20Q7Z614 316 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 SYTL1Q8IYJ3 562 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ACTL9Q8TC94 416 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 KRT35Q92764 455 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 OR52A5Q9H2C5 316 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 TFB2MQ9H5Q4 396 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 MVB12BQ9H7P6 319 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ACTR5Q9H9F9 607 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 PCMTD2Q9NV79 361 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 EFR3BQ9Y2G0 817 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 ZGRF1Q86YA3 2104 aa8.89□□□□□ -0.99
NIF3L1-203ENST00000409129 DCHS2Q6V1P9 2916 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 ARHGAP10A1A4S6 786 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 A6NL46 340 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 IFRD1O00458 451 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 BTN3A1O00481 513 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 ZNF185O15231 689 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 KCNN4O15554 427 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 DPM1O60762 260 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 DIAPH2O60879 1101 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 STK10O94804 968 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 LDLRP01130 860 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 HBQ1P09105 142 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 RBP3P10745 1247 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 PTMSP20962 102 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 PDHA2P29803 388 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 LMAN1P49257 510 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 CDKN1CP49918 316 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 ZNF140P52738 457 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 ITGA1P56199 1179 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 EIF3EP60228 445 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 OTUD4Q01804 1114 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 RPA4Q13156 261 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 INPP5JQ15735 1006 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 KRTAP21-3Q3LHN1 58 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 ZNF658BQ4V348 819 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 DENND5AQ6IQ26 1287 aa8.88□□□□□ -0.99
NIF3L1-203ENST00000409129 JMJD6Q6NYC1 403 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms