RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PREPP48147 710 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 KPNA2P52292 529 aaKnown RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 PPP1CAP62136 330 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 CYP4F2P78329 520 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 TPSAB1Q15661 275 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 CCDC38Q502W7 563 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 MRNIPQ6NTE8 343 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 C16orf46Q6P387 395 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 UNC5DQ6UXZ4 953 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 SDCCAG8Q86SQ7 713 aaPredicted RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 SYVN1Q86TM6 617 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PIANPQ8IYJ0 282 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 GPR135Q8IZ08 494 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 UNC5BQ8IZJ1 945 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 OTUD6BQ8N6M0 293 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PHC3Q8NDX5 983 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 OR13J1Q8NGT2 312 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 OR5K2Q8NHB8 316 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 C9orf43Q8TAL5 461 aaPredicted RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 THAP4Q8WY91 577 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 HDAC10Q969S8 669 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 SLC22A18Q96BI1 424 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 CARD6Q9BX69 1037 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PITPNM3Q9BZ71 974 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 IL17BQ9UHF5 180 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 GNPTGQ9UJJ9 305 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 SERTAD3Q9UJW9 196 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 G3BP2Q9UN86 482 aaKnown RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PADI2Q9Y2J8 665 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 GOLGA6L10A0A0M3HER8 536 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 SLC5A10A0PJK1 596 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 PIPSLA2A3N6 862 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 C9J4A7 227 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 E7EQ34 232 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 H3BMM5 538 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 BTN3A1O00481 513 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 PRMT5O14744 637 aaPredicted RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 NKX2-8O15522 239 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 KATNA1O75449 491 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 NDUFS3O75489 264 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 CREG1O75629 220 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 RFPL1O75677 317 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 FKBP9O95302 570 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 OAS2P29728 719 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 PRDX3P30048 256 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 RPL22P35268 128 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 CDKN1CP49918 316 aaPredicted RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 ITGA1P56199 1179 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 KCNAB1Q14722 419 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 KIR2DS3Q14952 304 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 DEFB109BQ30KR1 87 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 ZNF658BQ4V348 819 aaPredicted RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 PTRHD1Q6GMV3 140 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 PWWP2BQ6NUJ5 590 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 SPESP1Q6UW49 350 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 DCUN1D3Q8IWE4 304 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 SLC22A15Q8IZD6 547 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 LILRA3Q8N6C8 439 aaPredicted RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 EXD3Q8N9H8 876 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 MAGEC3Q8TD91 643 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 DENND1AQ8TEH3 1009 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 ANP32BQ92688 251 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 MR1Q95460 341 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 ZNF501Q96CX3 271 aaPredicted RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 TCTN2Q96GX1 697 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 PBKQ96KB5 322 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 FOPNLQ96NB1 174 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 TWSG1Q9GZX9 223 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 CHRNA10Q9GZZ6 450 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 MRM3Q9HC36 420 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 INTS7Q9NVH2 962 aaKnown RBP8.81□□□□□ -1
SNORD88A-201ENST00000408314 ACTR10Q9NZ32 417 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 SAMD15Q9P1V8 674 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 ANAPC2Q9UJX6 822 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 MAN2B2Q9Y2E5 1009 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 PPP2R2CQ9Y2T4 447 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 JRKLQ9Y4A0 524 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 AP1M2Q9Y6Q5 423 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 PIKFYVEQ9Y2I7 2098 aa8.81□□□□□ -1
SNORD88A-201ENST00000408314 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 A0A0J9YY10 115 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 OR51F1A6NGY5 319 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 SLC9B1P1A6NJY1 282 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TMEM150CB9EJG8 249 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 BTN3A3O00478 584 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TERTO14746 1132 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 CD3EAPO15446 510 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 ZSCAN12O43309 604 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 NTRK1P04629 796 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 CHRM5P08912 532 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 RAB40ALP0C0E4 278 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 PRSS56P0CW18 603 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 AGXTP21549 392 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 RPS3P23396 243 aaKnown RBP eCLIP8.8□□□□□ -1
SNORD88A-201ENST00000408314 ACADLP28330 430 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 PDHA2P29803 388 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms