RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GLYATL1P3A0A0U1RQE8 302 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PCDH17O14917 1159 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FAM228BP0C875 321 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AGXTP21549 392 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PTPN3P26045 913 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HTR1EP28566 365 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 WNT3AP56704 352 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DCDP81605 110 aaKnown RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CDC16Q13042 620 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AIMP2Q13155 320 aaKnown RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PDK2Q15119 407 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PPP2R5EQ16537 467 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF630Q2M218 657 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NKAIN1Q4KMZ8 207 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 BCL7AQ4VC05 210 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PRAMEF13Q5VWM6 474 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC9A4Q6AI14 798 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 COX15Q7KZN9 410 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DTWD1Q8N5C7 304 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC25A41Q8N5S1 370 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ACVR1CQ8NER5 493 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OXNAD1Q96HP4 312 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CNDP1Q96KN2 507 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 LINC00615Q96LM1 132 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR52A5Q9H2C5 316 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ACTR10Q9NZ32 417 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 IFT80Q9P2H3 777 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NENFQ9UMX5 172 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ICKQ9UPZ9 632 aa11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MYO1FO00160 1098 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DIAPH2O60879 1101 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR2B3O76000 313 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PROSCO94903 275 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC35G4P0C7Q5 338 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PTGER4P35408 488 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 XIAPP98170 497 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 WASHC5Q12768 1159 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PRKAA1Q13131 559 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PRKG2Q13237 762 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CYP2A13Q16696 494 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TEX44Q53QW1 395 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SPESP1Q6UW49 350 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 BNC2Q6ZN30 1099 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SHISA6Q6ZSJ9 500 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DNAJC22Q8N4W6 341 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 C19orf47Q8N9M1 422 aaKnown RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF398Q8TD17 642 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TEKT5Q96M29 485 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 NAP1L5Q96NT1 182 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR2A14Q96R47 310 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FERD3LQ96RJ6 166 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SPSB2Q99619 263 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZCCHC2Q9C0B9 1178 aaKnown RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC7A5P2Q9GIP4 190 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TFB2MQ9H5Q4 396 aaKnown RBP11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OLAHQ9NV23 265 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HAUS2Q9NVX0 235 aa11.46□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GTF3C1Q12789 2109 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FLNAP21333 2647 aaKnown RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZSCAN9O15535 394 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HBQ1P09105 142 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 UGT2B7P16662 529 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NFKB1P19838 968 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MSH3P20585 1137 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MMP11P24347 488 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MST1P26927 711 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NDUFS1P28331 727 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PEBP1P30086 187 aaKnown RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AKT1P31749 480 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ADORA2A-AS1P86434 159 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OLIG2Q13516 323 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GSE1Q14687 1217 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LONRF2Q1L5Z9 754 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 B3GNTL1Q67FW5 361 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LINC00696Q6ZRV3 163 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MRGPRGQ86SM5 289 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LMNTD1Q8N9Z9 388 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PROKR1Q8TCW9 393 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 BLOC1S5Q8TDH9 187 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GORASP1Q9BQQ3 440 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HGH1Q9BTY7 390 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LMBRD1Q9NUN5 540 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SAE1Q9UBE0 346 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NDOR1Q9UHB4 597 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GPN3Q9UHW5 284 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ARL5AQ9Y689 179 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 COLEC10Q9Y6Z7 277 aa11.45□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ABCA4P78363 2273 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms