RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 CDH13P55290 713 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 CNTN2Q02246 1040 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 TMED4Q7Z7H5 227 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ZNF101Q8IZC7 436 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 SMARCD2Q92925 531 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 PIWIL1Q96J94 861 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 ALKBH4Q9NXW9 302 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 TESMINQ9Y4I5 508 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ZNF3P17036 446 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 AHCYP23526 432 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 PRKD1Q15139 912 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 SERPINA13PQ6UXR4 307 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 HFE2Q6ZVN8 426 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 C7orf61Q8IZ16 206 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ZSCAN4Q8NAM6 433 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 ZBTB8BQ8NAP8 495 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 FBXO5Q9UKT4 447 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 VWA7Q9Y334 891 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 RYKP34925 604 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 VTCN1Q7Z7D3 282 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 SEMA3CQ99985 751 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 HSPB11Q9Y547 144 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 NPEPPSL1A6NEC2 478 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 F8VP50 259 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 CLDN4O14493 209 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 PSMD10O75832 226 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 DDX6P26196 483 aaKnown RBP eCLIP13.64□□□□□ -0.23
RERE-204ENST00000400908 MC4RP32245 332 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 IQCCQ4KMZ1 466 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 ALG2Q9H553 416 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 BCAS1O75363 584 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 SLC25A14O95258 325 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 ZNF286BP0CG31 522 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 TGFB3P10600 412 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 POU2F1P14859 743 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 BDNFP23560 247 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 CTBP1Q13363 440 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 BTG3Q14201 252 aaPredicted RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 INTS6LQ5JSJ4 861 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 OR6K6Q8NGW6 343 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 OVCA2Q8WZ82 227 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 EXOSC8Q96B26 276 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 IMP3Q9NV31 184 aaKnown RBP13.64□□□□□ -0.23
RERE-204ENST00000400908 DNAJC28Q9NX36 388 aa13.64□□□□□ -0.23
RERE-204ENST00000400908 HSPA12AO43301 675 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 GADD45GO95257 159 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 CD36P16671 472 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 ZNF16P17020 682 aaPredicted RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 ITPKAP23677 461 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 IL12BP29460 328 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 ACADVLP49748 655 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 MERTKQ12866 999 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 SNAP47Q5SQN1 464 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 OR7G2Q8NG99 324 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 GBA2Q9HCG7 927 aaPredicted RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 SLCO1B3Q9NPD5 702 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 TRAV19A0A0A6YYK7 116 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 MEN1O00255 615 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 CXCL11O14625 94 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 BPGMP07738 259 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 ANXA3P12429 323 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 HOXC8P31273 242 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 HERV-K104P61576 105 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 E2F1Q01094 437 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 IFI44LQ53G44 452 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 REP15Q6BDI9 236 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 CREG2Q8IUH2 290 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 RAVER1Q8IY67 606 aaKnown RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 C9orf43Q8TAL5 461 aaPredicted RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 CREB3L1Q96BA8 519 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 MSANTD3Q96H12 275 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 JSRP1Q96MG2 331 aaPredicted RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 MECRQ9BV79 373 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 MRPL17Q9NRX2 175 aaKnown RBP13.63□□□□□ -0.23
RERE-204ENST00000400908 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 PCYOX1Q9UHG3 505 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 ABCC6O95255 1503 aa13.63□□□□□ -0.23
RERE-204ENST00000400908 OR12D2P58182 307 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms