RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CCDC74AQ96AQ1 378 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ZNF768Q9H5H4 540 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 SENP1Q9P0U3 644 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 LRIT1Q9P2V4 623 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 COPG2Q9UBF2 871 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 OR5K3A6NET4 321 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 H3BQF6 201 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CCL22O00626 93 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GPR39O43194 453 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 KLK8O60259 260 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 KRT37O76014 449 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 C1orf105O95561 183 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ITGA2BP08514 1039 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ADRB1P08588 477 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 THRAP10827 490 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CYP2A7P20853 494 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 AK4P27144 223 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 CD1CP29017 333 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 RAB28P51157 221 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ABATP80404 500 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 MPP1Q00013 466 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CTBP1Q13363 440 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GRB7Q14451 532 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 TRADDQ15628 312 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CCDC6Q16204 474 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ANKS6Q68DC2 871 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CNSTQ6PJW8 725 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CLEC14AQ86T13 490 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 OOSP2Q86WS3 158 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CFAP206Q8IYR0 622 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 LSMEM2Q8N112 164 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GIMAP7Q8NHV1 300 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 FBXL8Q96CD0 374 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ZDHHC12Q96GR4 267 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 MAGEB10Q96LZ2 347 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 CCDC138Q96M89 665 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CCDC3Q9BQI4 270 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 NMRAL1Q9HBL8 299 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 FBXO6Q9NRD1 293 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 PSMC3IPQ9P2W1 217 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 WDR37Q9Y2I8 494 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 TSC22D4Q9Y3Q8 395 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 OARD1Q9Y530 152 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PCDHGA3Q9Y5H0 932 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ASCC3Q8N3C0 2202 aaKnown RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 IQANK1A0A1B0GTG1 560 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 TLCD2A6NGC4 264 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 TARM1B6A8C7 271 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 MTX2O75431 263 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 BANF1O75531 89 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 RHOXF2BP0C7M4 288 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PRSS56P0CW18 603 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 STMN1P16949 149 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 FMO4P31512 558 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 NOVA1P51513 510 aaKnown RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 INSM1Q01101 510 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 SLC30A9Q6PML9 568 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CES3Q6UWW8 571 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ARHGAP22Q7Z5H3 698 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GATAD2AQ86YP4 633 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 MYO1HQ8N1T3 1032 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CCL4L1Q8NHW4 92 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 LKAAEAR1Q8TD35 194 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 MZB1Q8WU39 189 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 IFT81Q8WYA0 676 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 C9orf72Q96LT7 481 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CAMK1GQ96NX5 476 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 TEFMQ96QE5 360 aaKnown RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 RHOXF2Q9BQY4 288 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 DDA1Q9BW61 102 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CAPS2Q9BXY5 557 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 FSCN3Q9NQT6 498 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PRDM8Q9NQV8 689 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GPRC5BQ9NZH0 403 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 OGFRQ9NZT2 677 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 POMT2Q9UKY4 750 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PCDHGA7Q9Y5G6 932 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ACTL7BQ9Y614 415 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 B4DGG1 531 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PPM1DO15297 605 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CDH16O75309 829 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 NIPSNAP2O75323 286 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 UBXN7O94888 489 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 SNRPAP09012 282 aaKnown RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 VSNL1P62760 191 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PPP1R3AQ16821 1122 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 ZNF648Q5T619 568 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 C10orf62Q5T681 223 aaPredicted RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 TRIM48Q8IWZ4 208 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 CLDN19Q8N6F1 224 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 OTUD6BQ8N6M0 293 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PDPRQ8NCN5 879 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 DEFB124Q8NES8 71 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 KIAA1191Q96A73 305 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 SLC41A2Q96JW4 573 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms