RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ACCSLQ4AC99 568 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NADK2Q4G0N4 442 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NANOGNBQ7Z5D8 188 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RSC1A1Q92681 617 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DVL3Q92997 716 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RAB24Q969Q5 203 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NSUN5Q96P11 429 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 VRK1Q99986 396 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DPH2Q9BQC3 489 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 WDR83Q9BRX9 315 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TPPP3Q9BW30 176 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ECT2Q9H8V3 914 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PARVAQ9NVD7 372 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NCDNQ9UBB6 729 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 MARCOQ9UEW3 520 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 AP4B1Q9Y6B7 739 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PMF1-BGLAPU3KQ54 211 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM237BA0A1B0GVD1 139 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ELOVL7A1L3X0 281 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 H7C0C1 242 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ECI2O75521 394 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CBX6O95503 412 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TNNC2P02585 160 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 MIPP30301 263 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TUFMP49411 452 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NDST1P52848 882 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CDH6P55285 790 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 VBP1P61758 197 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 YWHAGP61981 247 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SRSF5Q13243 272 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF667Q5HYK9 610 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CGB2Q6NT52 195 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM53Q6P2H8 277 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RHBDF2Q6PJF5 856 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 METTL7BQ6UX53 244 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZBTB8OSQ8IWT0 167 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TP53INP2Q8IXH6 220 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM35BQ8NCS4 154 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 OR2T3Q8NH03 318 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 OR1E3Q8WZA6 343 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ATXN7L3BQ96GX2 97 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC4A5Q9BY07 1137 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 P2RY12Q9H244 342 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RPF1Q9H9Y2 349 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 MRM3Q9HC36 420 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC17A7Q9P2U7 560 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RANBP2P49792 3224 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 ADGRA2Q96PE1 1338 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 A0A0G2JLL6 359 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 IQANK1A0A1B0GTG1 560 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 IQCF5A8MTL0 148 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 DYRK3O43781 588 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM189A1O60320 539 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CNMDO75829 334 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 SRCP12931 536 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 HOXA7P31268 230 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PITX1P78337 314 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 RING1Q06587 406 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CRYMQ14894 314 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CFAP157Q5JU67 520 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM219BQ5XKK7 198 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CPZQ66K79 652 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PLEKHA7Q6IQ23 1121 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CYB5D1Q6P9G0 228 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC24A5Q71RS6 500 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PRRT2Q7Z6L0 340 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 C12orf40Q86WS4 652 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PROSER1Q86XN7 944 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF573Q86YE8 665 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PYROXD2Q8N2H3 581 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 ELP5Q8TE02 316 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 APBB2Q92870 758 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 FBXL20Q96IG2 436 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 MECRQ9BV79 373 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 ARL8BQ9NVJ2 186 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 GPATCH2Q9NW75 528 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 GULP1Q9UBP9 304 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 TUBGCP4Q9UGJ1 667 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 PLEKHA6Q9Y2H5 1048 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 A0A0G2JMZ2 1700 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 C5orf42Q9H799 3197 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CITO14578 2027 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 hCG_1818297A0A087WSY0 165 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CCT8L1PA6NM43 557 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CIB2O75838 187 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 CLUP10909 449 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 GABRB1P18505 474 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 GCAP28676 217 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 GRK3P35626 688 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 LTBRP36941 435 aa6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 ALDH7A1P49419 539 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-202ENST00000399438 RAD23BP54727 409 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms