RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 KLK8O60259 260 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 OR1I1O60431 355 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 THP07101 528 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 CD36P16671 472 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 PIK3CGP48736 1102 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 CLK3P49761 638 aaKnown RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 MAPKAPK3Q16644 382 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 DUSP28Q4G0W2 176 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 STEAP3Q658P3 488 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 BRSK1Q8TDC3 778 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 TXNDC15Q96J42 360 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ZNF382Q96SR6 550 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ZBTB20Q9HC78 741 aaPredicted RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 CPNE5Q9HCH3 593 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ITM2CQ9NQX7 267 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 PKP3Q9Y446 797 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 ASNA1O43681 348 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 FAM20BO75063 409 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 CREG1O75629 220 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 RFPL2O75678 378 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 FGF1P05230 155 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 BMPR1AP36894 532 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 SCNN1GP51170 649 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 CDC20Q12834 499 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 GTF2H3Q13889 308 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 C10orf111Q8N326 155 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 OR4F6Q8NGB9 312 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 OR10T2Q8NGX3 314 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 TRIM62Q9BVG3 475 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 ZYG11BQ9C0D3 744 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 C6orf62Q9GZU0 229 aaPredicted RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 TP63Q9H3D4 680 aaPredicted RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 KAT8Q9H7Z6 458 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 SP140LQ9H930 580 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 ACOT13Q9NPJ3 140 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 RASSF1Q9NS23 344 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 DCAF13Q9NV06 445 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.72□□□□□ -0.21
APOB-202ENST00000399256 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 TTC3P53804 2025 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 WASH4PA8MWX3 477 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 M0QX08 132 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 SCELO95171 688 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 TSPAN12O95859 305 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 EIF2S1P05198 315 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 ITGAMP11215 1152 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 GTF2E2P29084 291 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 FCGRTP55899 365 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 IL18R1Q13478 541 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 GBX1Q14549 363 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 SPANXN4Q5MJ08 99 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 RNF19BQ6ZMZ0 732 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 HIPK1Q86Z02 1210 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 MICU2Q8IYU8 434 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 NKAPQ8N5F7 415 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 SETD9Q8NE22 299 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 OR4K2Q8NGD2 314 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 TADA1Q96BN2 335 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 DCSTAMPQ9H295 470 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 ZFP14Q9HCL3 533 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 SLC6A13Q9NSD5 602 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 TRMT6Q9UJA5 497 aaKnown RBP13.72□□□□□ -0.21
APOB-202ENST00000399256 SPO11Q9Y5K1 396 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 ACTL7AQ9Y615 435 aa13.72□□□□□ -0.21
APOB-202ENST00000399256 MBLAC1A4D2B0 266 aaPredicted RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 RGS10O43665 173 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 AKT1P31749 480 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 ACVRL1P37023 503 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 DMPKQ09013 629 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 SYT16Q17RD7 645 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 TEX26Q8N6G2 289 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 KRTCAP2Q8N6L1 136 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 UBE2FQ969M7 185 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 ZBTB18Q99592 522 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 PLXNB2O15031 1838 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 MYO1GB0I1T2 1018 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 H0Y626 953 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 TRIM16O95361 564 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 RHOQP17081 205 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 TGFBR2P37173 567 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CLK1P49759 484 aaKnown RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 RFX4Q33E94 735 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CARD16Q5EG05 197 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 SDHAF4Q5VUM1 108 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CEP68Q76N32 757 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 CHPFQ8IZ52 775 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 SVOPQ8N4V2 548 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms