RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 METTL2AQ96IZ6 378 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 VPS35Q96QK1 796 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C1orf50Q9BV19 199 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SMG9Q9H0W8 520 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF696Q9H7X3 374 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HCFC1R1Q9NWW0 138 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C1orf109Q9NX04 203 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 WBP1LQ9NX94 342 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PDE10AQ9Y233 779 aa17.35■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PTPRSQ13332 1948 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SMIM31A0A1B0GVY4 71 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HIDE1A8MVS5 230 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 LOC730098B7Z3J9 87 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C5orf67F2Z3F1 127 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KCNH1O95259 989 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 FAM58BPP0C7Q3 252 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PRPS2P11908 318 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ATP6V1B2P21281 511 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 MAPK1P28482 360 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 IL12AP29459 219 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CCR3P51677 355 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HNRNPFP52597 415 aaKnown RBP17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ATXN3P54252 364 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 BOP1Q14137 746 aaKnown RBP17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 IMPG1Q17R60 797 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TIGD2Q4W5G0 525 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 RFTN2Q52LD8 501 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF805Q5CZA5 627 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SCIMPQ6UWF3 145 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DLEU7Q6UYE1 221 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZBTB49Q6ZSB9 765 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 RASGRP3Q8IV61 690 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KIAA2013Q8IYS2 634 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 L3MBTL4Q8NA19 623 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 MFSD2AQ8NA29 543 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DNAJB14Q8TBM8 379 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 POF1BQ8WVV4 589 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TCEAL4Q96EI5 215 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 LRCH3Q96II8 777 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C9orf16Q9BUW7 83 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SPATA16Q9BXB7 569 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 COQ10BQ9H8M1 238 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 LRTM1Q9HBL6 345 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 AGPAT4Q9NRZ5 378 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PRKAG2Q9UGJ0 569 aa17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF490Q9ULM2 529 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-204ENST00000399084 A8MX80 341 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 AKAP10O43572 662 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 BNIP3LO60238 219 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TULP3O75386 442 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GMNNO75496 209 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 RSL1D1O76021 490 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PSMC3P17980 439 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HTR6P50406 440 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 FPGSQ05932 587 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CAPRIN1Q14444 709 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KIAA0040Q15053 153 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C18orf21Q32NC0 220 aaPredicted RBP17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 EML3Q32P44 896 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PLPP4Q5VZY2 271 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 FBXL19Q6PCT2 694 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DPPA4Q7L190 304 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CELF5Q8N6W0 485 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 OR52E4Q8NGH9 312 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ATL1Q8WXF7 558 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CCDC97Q96F63 343 aaPredicted RBP17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CGREF1Q99674 301 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DPY30Q9C005 99 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ACTL8Q9H568 366 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 EPHX3Q9H6B9 360 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ACTR8Q9H981 624 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SLC27A6Q9Y2P4 619 aa17.33■□□□□ 0.37
HLA-DQB1-204ENST00000399084 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLCO2B1O94956 709 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PABPC4LP0CB38 370 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 XPAP23025 273 aaPredicted RBP17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLC6A12P48065 614 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PCDH1Q08174 1060 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ZNF284Q2VY69 593 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 LIN52Q52LA3 116 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MSANTD1Q6ZTZ1 278 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SPPL2CQ8IUH8 684 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ADGRG5Q8IZF4 528 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CHST14Q8NCH0 376 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MRGPRX3Q96LB0 322 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CCDC115Q96NT0 180 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 KLQ9UEF7 1012 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 IL36AQ9UHA7 158 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ANAPC2Q9UJX6 822 aa17.33■□□□□ 0.36
HLA-DQB1-204ENST00000399084 EIF4E1BA6NMX2 242 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ZNF839A8K0R7 811 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TLL1O43897 1013 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TIMP2P16035 220 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMTC4Q5T4D3 741 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HENMT1Q5T8I9 393 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ERAP2Q6P179 960 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GALNT4Q8N4A0 578 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLC13A3Q8WWT9 602 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 FBXL8Q96CD0 374 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms