RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 HNRNPCP07910 306 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ALPIP09923 528 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 TFPTP0C1Z6 253 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ZNF7P17097 686 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 RPS3P23396 243 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 CA5AP35218 305 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 GDF5P43026 501 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 HMGCS1Q01581 520 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 MAD2L1Q13257 205 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 SKIV2LQ15477 1246 aaKnown RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 MOGQ16653 247 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 SPANXN4Q5MJ08 99 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 FAM151BQ6UXP7 276 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 GALNT13Q8IUC8 556 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 NPAS4Q8IUM7 802 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 HS3ST5Q8IZT8 346 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 NRBF2Q96F24 287 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 FEM1AQ9BSK4 669 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 FAM126AQ9BYI3 521 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 DPY30Q9C005 99 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ACTR8Q9H981 624 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 USE1Q9NZ43 259 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 SCN5AQ14524 2016 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ELOVL7A1L3X0 281 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 NOBOXO60393 691 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 GSTM2P28161 218 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 C21orf59P57076 290 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 EPS8Q12929 822 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 LAPTM5Q13571 262 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PHKG1Q16816 387 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 SMU1Q2TAY7 513 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 DNAJC14Q6Y2X3 702 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-203ENST00000398969 FKBP9P1Q75LS8 142 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 SPARTQ8N0X7 666 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 LIX1Q8N485 282 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 GLB1L3Q8NCI6 653 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-203ENST00000398969 BPIFB6Q8NFQ5 453 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 WBP2Q969T9 261 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 EGFL8Q99944 293 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 APOL5Q9BWW9 433 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 MAGEE1Q9HCI5 957 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 ANGPTL3Q9Y5C1 460 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 SLC28A1O00337 649 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 CXCR6O00574 342 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 ADAM12O43184 909 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 HOXA2O43364 376 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PRAMEF1O95521 474 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PGRP06401 933 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 IRF1P10914 325 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 CCL5P13501 91 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PIGAP37287 484 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 RGS4P49798 205 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 CCL23P55773 120 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 ANKS3Q6ZW76 656 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 TMEM173Q86WV6 379 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-203ENST00000398969 SVOPLQ8N434 492 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 CHDHQ8NE62 594 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-203ENST00000398969 RAB2BQ8WUD1 216 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 FAM162AQ96A26 154 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PLEKHA8Q96JA3 519 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 TBCDQ9BTW9 1192 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 CD244Q9BZW8 370 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 ZFP14Q9HCL3 533 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 OPTCQ9UBM4 332 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 PRSS21Q9Y6M0 314 aa25.06■■□□□ 1.6
COL13A1-203ENST00000398969 GAPDHSO14556 408 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 SCELO95171 688 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 IL6P05231 212 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 RHOAP61586 193 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 RUNDC3AQ59EK9 446 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 ATXN7L2Q5T6C5 722 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 ANKRD34AQ69YU3 496 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 RNF165Q6ZSG1 346 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 KRTCAP2Q8N6L1 136 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 ZNF555Q8NEP9 628 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 OR52E4Q8NGH9 312 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 KLQ9UEF7 1012 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 GNPTGQ9UJJ9 305 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 PRKD3O94806 890 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 MZF1P28698 734 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 GNPDA1P46926 289 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 C6orf141Q5SZD1 244 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 GTF2IRD2BQ6EKJ0 949 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 GTF2IRD2Q86UP8 949 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 RBM4BQ9BQ04 359 aaKnown RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 RBM4Q9BWF3 364 aaKnown RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 CLMPQ9H6B4 373 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 GPN2Q9H9Y4 310 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 WWOXQ9NZC7 414 aa25.05■■□□□ 1.6
COL13A1-203ENST00000398969 FCF1Q9Y324 198 aaKnown RBP25.05■■□□□ 1.6
COL13A1-203ENST00000398969 C16orf96A6NNT2 1141 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 GNGT2O14610 69 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 CXCL10P02778 98 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 GALTP07902 379 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 HTR1AP08908 422 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 BMXP51813 675 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 TPD52P55327 224 aaPredicted RBP25.04■■□□□ 1.6
COL13A1-203ENST00000398969 MEP1AQ16819 746 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 IMPG1Q17R60 797 aa25.04■■□□□ 1.6
COL13A1-203ENST00000398969 GTDC1Q4AE62 458 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms