RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 EPG5Q9HCE0 2579 aa13.89□□□□□ -0.19
HDDC2-202ENST00000398153 USP24Q9UPU5 2620 aa13.89□□□□□ -0.19
HDDC2-202ENST00000398153 ACACAQ13085 2346 aa13.89□□□□□ -0.19
HDDC2-202ENST00000398153 ZZEF1O43149 2961 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 IQCF5A8MTL0 148 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 A8MU76 341 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-202ENST00000398153 E5RI56 91 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 RASSF9O75901 435 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 HGFP14210 728 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 ITIH1P19827 911 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CHRM3P20309 590 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CCNFP41002 786 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 SLC1A2P43004 574 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 GFERP55789 205 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CTBP1Q13363 440 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 GBX1Q14549 363 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 IL11RAQ14626 422 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 SNAP47Q5SQN1 464 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 DCAF12Q5T6F0 453 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 STEAP4Q687X5 459 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 IRGCQ6NXR0 463 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 TTC23LQ6PF05 361 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CEACAM20Q6UY09 585 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 NEK10Q6ZWH5 1172 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 DENND6AQ8IWF6 608 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 PHC3Q8NDX5 983 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 OR4E2Q8NGC2 313 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 FOPNLQ96NB1 174 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 C1GALT1Q9NS00 363 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 SLC39A1Q9NY26 324 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 CORO1CQ9ULV4 474 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-202ENST00000398153 PCDHB11Q9Y5F2 797 aa13.88□□□□□ -0.19
HDDC2-202ENST00000398153 KMT2BQ9UMN6 2715 aaPredicted RBP13.88□□□□□ -0.19
HDDC2-202ENST00000398153 OR6C74A6NCV1 312 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 EFCAB7A8K855 629 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 EIF3FO00303 357 aaPredicted RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 CCL4P13236 92 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 ITGB6P18564 788 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 CD9P21926 228 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 SKIV2L2P42285 1042 aaKnown RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 MAPK10P53779 464 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 UCNP55089 124 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 PDIA2Q13087 525 aaKnown RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 LRRC8EQ6NSJ5 796 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 UGT3A1Q6NUS8 523 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 C8orf74Q6P047 294 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 UNC5AQ6ZN44 842 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 CYS1Q717R9 158 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 FAM129CQ86XR2 697 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 IGDCC3Q8IVU1 814 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 DCUN1D3Q8IWE4 304 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 OR5AR1Q8NGP9 310 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 LKAAEAR1Q8TD35 194 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 KCNE4Q8WWG9 221 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 ZNF592Q92610 1267 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 USP7Q93009 1102 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 ART4Q93070 314 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 SLC41A2Q96JW4 573 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 RAB11FIP5Q9BXF6 653 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 FAM129AQ9BZQ8 928 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 IARS2Q9NSE4 1012 aaKnown RBP13.87□□□□□ -0.19
HDDC2-202ENST00000398153 IL1RAPL1Q9NZN1 696 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 KLHL3Q9UH77 587 aa13.87□□□□□ -0.19
HDDC2-202ENST00000398153 APC2O95996 2303 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 PMS2P1A4D2B8 440 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 C2orf74A8MZ97 194 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 C9orf172C9J069 976 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 MAP3K7O43318 606 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 NIPSNAP2O75323 286 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 BANF1O75531 89 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 HAUS5O94927 633 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 MATN4O95460 622 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 ZBTB11O95625 1053 aaPredicted RBP13.86□□□□□ -0.19
HDDC2-202ENST00000398153 MSL3P1P0C860 447 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 CBSLP0DN79 551 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 ERVK-10P10266 1014 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 ENO3P13929 434 aaPredicted RBP13.86□□□□□ -0.19
HDDC2-202ENST00000398153 CBSP35520 551 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 ETV5P41161 510 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 RAB28P51157 221 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 CLCN7P51798 805 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 HSD11B2P80365 405 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 PRKG2Q13237 762 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 KYNUQ16719 465 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
HDDC2-202ENST00000398153 NAPRTQ6XQN6 538 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 FAM92BQ6ZTR7 304 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 VRK3Q8IV63 474 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 MMGT1Q8N4V1 131 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 ZBTB2Q8N680 514 aa13.86□□□□□ -0.19
HDDC2-202ENST00000398153 FBXO36Q8NEA4 188 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms