RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PSMC3P17980 439 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CHRM3P20309 590 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 C5AR1P21730 350 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CTNNB1P35222 781 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TNFRSF4P43489 277 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PIWIL3Q7Z3Z3 882 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PTAR1Q7Z6K3 402 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 DCP2Q8IU60 420 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 POF1BQ8WVV4 589 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CMTM7Q96FZ5 175 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 KCNH6Q9H252 994 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PREBQ9HCU5 417 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MID1IP1Q9NPA3 183 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GAPDHSO14556 408 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ANKRD28O15084 1053 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MOSPD3O75425 235 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 IGLV3-19P01714 112 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CTPS1P17812 591 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RAD23AP54725 363 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PFKFB4Q16877 469 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 WDR45BQ5MNZ6 344 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 FBXW10Q5XX13 1052 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 NPAS3Q8IXF0 933 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GOT1L1Q8NHS2 421 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 SLC35B4Q969S0 331 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 SLC22A18Q96BI1 424 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 LINGO1Q96FE5 620 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GBP5Q96PP8 586 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ELOVL6Q9H5J4 265 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 B4GALT6Q9UBX8 382 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TPRP12270 2363 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HGFP14210 728 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ITGAXP20702 1163 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 VARSP26640 1264 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RGRP47804 291 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RCN1Q15293 331 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TSNQ15631 228 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM259Q4ZIN3 620 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 LY6G5CQ5SRR4 150 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ERMP1Q7Z2K6 904 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RALGPS2Q86X27 583 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TRIML2Q8N7C3 387 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 OR2T34Q8NGX1 318 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 OR2T3Q8NH03 318 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 OR56A3Q8NH54 315 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RFWD2Q8NHY2 731 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ZFAND2BQ8WV99 257 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 SMPDL3AQ92484 453 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 COQ10AQ96MF6 247 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TRIM39Q9HCM9 518 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 NEUROD4Q9HD90 331 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 VCX3AQ9NNX9 186 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PCOLCE2Q9UKZ9 415 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PCDHGC4Q9Y5F7 938 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ARHGAP10A1A4S6 786 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 VILLO15195 856 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TNFAIP8O95379 198 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 EPHA3P29320 983 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HMOX2P30519 316 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RPIAP49247 311 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 YPEL5P62699 121 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PHEXP78562 749 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ANXA8L1Q5VT79 327 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 BHLHB9Q6PI77 547 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PAGE2Q7Z2X7 111 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MRPL38Q96DV4 380 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MAGED4Q96JG8 741 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MECRQ9BV79 373 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 KLHL4Q9C0H6 718 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 C8orf33Q9H7E9 229 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 SIAEQ9HAT2 523 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 DYRK4Q9NR20 520 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GEMIN8Q9NWZ8 242 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GTSE1Q9NYZ3 720 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HEBP2Q9Y5Z4 205 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 A0A096LPI6 279 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 LHCGRP22888 699 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MUM1Q2TAK8 710 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM35AQ53FP2 167 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CAPN13Q6MZZ7 669 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CES5AQ6NT32 575 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ARHGAP36Q6ZRI8 547 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ELSPBP1Q96BH3 223 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 EBF4Q9BQW3 602 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MVB12BQ9H7P6 319 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 KLF15Q9UIH9 416 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 BTNL2Q9UIR0 455 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CCL27Q9Y4X3 112 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 WDR91A4D1P6 747 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CCDC159P0C7I6 412 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ADH5P11766 374 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 EML3Q32P44 896 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 KHDC1Q4VXA5 237 aaKnown RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 RFWD3Q6PCD5 774 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM64Q6YI46 380 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 SVOPLQ8N434 492 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 WDR60Q8WVS4 1066 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms