RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CXCL16Q9H2A7 254 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 KAT8Q9H7Z6 458 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 SMURF2Q9HAU4 748 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 MIOSQ9NXC5 875 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 NUDT4Q9NZJ9 180 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 PTGDR2Q9Y5Y4 395 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 EVPLQ92817 2033 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 TRAV19A0A0A6YYK7 116 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 NEDD8-MDP1E9PL57 170 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 H3BM21 787 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ALOX5P09917 674 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 BMP7P18075 431 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 HERC3Q15034 1050 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ZFP69Q49AA0 526 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 RAVER1Q8IY67 606 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 HM13Q8TCT9 377 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ANKRD49Q8WVL7 239 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 UTP4Q969X6 686 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 EXOSC8Q96B26 276 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 GFM1Q96RP9 751 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 C8orf4Q9NR00 106 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 DNAJB9Q9UBS3 223 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 FAM234BA2RU67 622 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 SAP18O00422 153 aaKnown RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 HTRA2O43464 458 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 SERPINB7O75635 380 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 CNTN5O94779 1100 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ESR1P03372 595 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ALPIP09923 528 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 CD36P16671 472 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 SSR2P43308 183 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ADAM17P78536 824 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 SNAPC1Q16533 368 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 COLEC12Q5KU26 742 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 ANXA8L1Q5VT79 327 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 PRSS55Q6UWB4 352 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-204ENST00000397545 UBE2E3Q969T4 207 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 TMEM209Q96SK2 561 aa10.58□□□□□ -0.72
CCDC40-204ENST00000397545 MCM3APO60318 1980 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 A0A1B0GVM2 712 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 TCAF2A6NFQ2 919 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 LRRC14BA6NHZ5 514 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ISM1B1AKI9 464 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SCAMP1O15126 338 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SSNA1O43805 119 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ASLP04424 464 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CYP3A5P20815 502 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SPAM1P38567 509 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 KCNQ1P51787 676 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 NDST2P52849 883 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MLLT6P55198 1093 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 OLR1P78380 273 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SFSWAPQ12872 951 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 NPTX1Q15818 432 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ZBTB6Q15916 424 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MEP1AQ16819 746 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CGB2Q6NT52 195 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 DSG4Q86SJ6 1040 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ARL14EPQ8N8R7 260 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MAGEH1Q9H213 219 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MUC13Q9H3R2 512 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MTRRQ9UBK8 725 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 FBXO10Q9UK96 956 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 AP3D1O14617 1153 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CDH5P33151 784 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 PIGFQ07326 219 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 C9orf64Q5T6V5 341 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 R3HCC1LQ7Z5L2 792 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ARFGAP1Q8N6T3 406 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 FAM110BQ8TC76 370 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MAPK15Q8TD08 544 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 NSUN5Q96P11 429 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 IL4I1Q96RQ9 567 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 TOR3AQ9H497 397 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 TFB2MQ9H5Q4 396 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 C11orf16Q9NQ32 467 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ASAH2Q9NR71 780 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 IMP3Q9NV31 184 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ASCC3Q8N3C0 2202 aaKnown RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 TRBV23OR9-2A0A075B6M9 112 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF99A8MXY4 864 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-204ENST00000397545 EFCAB9A8MZ26 197 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SDHDO14521 159 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 BEST1O76090 585 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 RPN2P04844 631 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 G6PDP11413 515 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 PTGER3P43115 390 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 COPZ1P61923 177 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 FAM180AQ6UWF9 173 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 ERMP1Q7Z2K6 904 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CFAP206Q8IYR0 622 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 TEX47Q8TBZ9 253 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 EEF1AKMT1Q8WVE0 214 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms