RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ADAP00813 363 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ESR1P03372 595 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 HEXAP06865 529 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 FHP07954 510 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ANXA7P20073 488 aaKnown RBP6.63□□□□□ -1.35
SMCO1-201ENST00000397537 GJC1P36383 396 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 MAP3K7CLP57077 242 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 DUSP2Q05923 314 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ALKBH1Q13686 389 aaKnown RBP6.63□□□□□ -1.35
SMCO1-201ENST00000397537 AANATQ16613 207 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 USP41Q3LFD5 358 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 SGO1Q5FBB7 561 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 KCTD11Q693B1 232 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ZBTB49Q6ZSB9 765 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 CABP7Q86V35 215 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 PALM2Q8IXS6 379 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 C8orf58Q8NAV2 365 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 TP53I13Q8NBR0 393 aaPredicted RBP6.63□□□□□ -1.35
SMCO1-201ENST00000397537 BBS1Q8NFJ9 593 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 TBC1D15Q8TC07 691 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 SLC22A8Q8TCC7 542 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ATP8B4Q8TF62 1192 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 DDI1Q8WTU0 396 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 CDKL2Q92772 493 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ESAMQ96AP7 390 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ISG20Q96AZ6 181 aaKnown RBP6.63□□□□□ -1.35
SMCO1-201ENST00000397537 ART5Q96L15 291 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 EHD3Q9NZN3 535 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 CNOT2Q9NZN8 540 aaKnown RBP6.63□□□□□ -1.35
SMCO1-201ENST00000397537 CTNNAL1Q9UBT7 734 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 POLLQ9UGP5 575 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 TRPM1Q7Z4N2 1603 aa6.63□□□□□ -1.35
SMCO1-201ENST00000397537 MAGEB16A2A368 324 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 HELTA6NFD8 242 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 AHRRA9YTQ3 701 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TRIM77I1YAP6 450 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ZNF213O14771 459 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ANKRD28O15084 1053 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 KLK8O60259 260 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ACADLP28330 430 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CDC25AP30304 524 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 GMPSP49915 693 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 MYL6P60660 151 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TPM4P67936 248 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TP53BP2Q13625 1128 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CCNIQ14094 377 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 SMN1Q16637 294 aaKnown RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 GPAT3Q53EU6 434 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 LRIF1Q5T3J3 769 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CERCAMQ5T4B2 595 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 GRHL2Q6ISB3 625 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 DPP8Q6V1X1 898 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 EFL1Q7Z2Z2 1120 aaKnown RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 GPAT4Q86UL3 456 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CAMK1DQ8IU85 385 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 AQP12AQ8IXF9 295 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CSGALNACT2Q8N6G5 542 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CMASQ8NFW8 434 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 C2CD4CQ8TF44 421 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 HMCESQ96FZ2 354 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ZNF583Q96ND8 569 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ANKRD27Q96NW4 1050 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TRIM62Q9BVG3 475 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 SPATC1LQ9H0A9 340 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 RHBGQ9H310 441 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 PANK3Q9H999 370 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ZNF446Q9NWS9 450 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TRNAU1APQ9NX07 287 aaKnown RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 DTX4Q9Y2E6 619 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 NPC1L1Q9UHC9 1359 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 KIF1BO60333 1816 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CYP3A7-CYP3A51PA0A087WV96 503 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ANKRD61A6NGH8 418 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CTDSPLO15194 276 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 AKR7A2O43488 359 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 AKAP8O43823 692 aaKnown RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ATG13O75143 517 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ZNF189O75820 626 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 LGI1O95970 557 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 AGTP01019 485 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 LINGO3P0C6S8 592 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ATP6V1C1P21283 382 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CYP3A7P24462 503 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 RPL13P26373 211 aaKnown RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 MMP13P45452 471 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 LOXL3P58215 753 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 HNRNPKP61978 463 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 B4GALNT1Q00973 533 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TGM3Q08188 693 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 SYT16Q17RD7 645 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CERKLQ49MI3 558 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 C18orf63Q68DL7 685 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 TXNRD3NBQ6F5E7 133 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 SLCO4C1Q6ZQN7 724 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 ZNF551Q7Z340 670 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-201ENST00000397537 NANOGNBQ7Z5D8 188 aa6.62□□□□□ -1.35
SMCO1-201ENST00000397537 CLEC14AQ86T13 490 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms