RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 EEF1DP29692 281 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 RPA4Q13156 261 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 C1orf61Q13536 156 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 PLK5Q496M5 336 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 RAB44Q7Z6P3 723 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 FAM174AQ8TBP5 190 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 MCOLN3Q8TDD5 553 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 CCDC126Q96EE4 140 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 CHMP6Q96FZ7 201 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ZDHHC5Q9C0B5 715 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 C20orf27Q9GZN8 174 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ACSL5Q9ULC5 683 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 GMNCA6NCL1 334 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 CATP04040 527 aaKnown RBP20.67■□□□□ 0.9
CPNE1-204ENST00000397443 CELA2BP08218 269 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-204ENST00000397443 ACADLP28330 430 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 DMPKQ09013 629 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 SP140Q13342 867 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 TUBB8Q3ZCM7 444 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 PHACTR4Q8IZ21 702 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 OR5AR1Q8NGP9 310 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 TFGQ92734 400 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-204ENST00000397443 C12orf66Q96MD2 445 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 ZNF317Q96PQ6 595 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-204ENST00000397443 TMEM74BQ9NUR3 256 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 IMP3Q9NV31 184 aaKnown RBP20.67■□□□□ 0.9
CPNE1-204ENST00000397443 TBC1D29Q9UFV1 150 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 ASB1Q9Y576 335 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 DGKBQ9Y6T7 804 aa20.67■□□□□ 0.9
CPNE1-204ENST00000397443 KLHL33A6NCF5 533 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 OR52A4PA6NMU1 304 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 SUPT7LO94864 414 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 SP9P0CG40 484 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 CTSEP14091 401 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 JUNDP17535 347 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ARRB2P32121 409 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 SLC1A6P48664 564 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 AFF3P51826 1226 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 C21orf59P57076 290 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 OVGP1Q12889 678 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 PRKG2Q13237 762 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 IQCHQ86VS3 1027 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 THOC1Q96FV9 657 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 WWOXQ9NZC7 414 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 APOBEC3BQ9UH17 382 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 TDRKHQ9Y2W6 561 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 FANCMQ8IYD8 2048 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 MYO15AQ9UKN7 3530 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 TRBV23OR9-2A0A075B6M9 112 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 C1orf105O95561 183 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 EML2O95834 649 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 IMPDH1P20839 514 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 HSPA7P48741 367 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ALDH18A1P54886 795 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 CDH13P55290 713 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 DNAJB13P59910 316 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 HERVK_113P63132 956 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 NFKB2Q00653 900 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ASPHQ12797 758 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ILF3Q12906 894 aaKnown RBP eCLIP20.66■□□□□ 0.97e-7■■■■■ 35.6
CPNE1-204ENST00000397443 LRP8Q14114 963 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 CLCA4Q14CN2 919 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 LPAL2Q16609 132 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ZNF678Q5SXM1 525 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ATG14Q6ZNE5 492 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 DCP2Q8IU60 420 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 AGR3Q8TD06 166 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 PPP4R1Q8TF05 950 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 NSUN5Q96P11 429 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 INSM2Q96T92 566 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ERVK-6Q9BXR3 956 aa20.66■□□□□ 0.9
CPNE1-204ENST00000397443 TRNAU1APQ9NX07 287 aaKnown RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 SCHIP1Q9P0W5 487 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 ARHGEF17Q96PE2 2063 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-204ENST00000397443 CCDC189A1A4V9 331 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 SLC16A5O15375 505 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 CHRNGP07510 517 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 ANXA5P08758 320 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 ENO2P09104 434 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-204ENST00000397443 GDF5P43026 501 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PRRT3Q5FWE3 981 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PRR23BQ6ZRT6 265 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 RGS9BPQ6ZS82 235 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 NRROSQ86YC3 692 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 RAB3IL1Q8TBN0 382 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 RHBDF1Q96CC6 855 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PITPNM3Q9BZ71 974 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 EPN3Q9H201 632 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 RDH14Q9HBH5 336 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 ABCF3Q9NUQ8 709 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PLAGL1Q9UM63 463 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 A0A1B0GVT2 93 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 KLF11O14901 512 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 TAPBPO15533 448 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 KLK8O60259 260 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 KCNJ13O60928 360 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 HSPA4LO95757 839 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 GRK2P25098 689 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 NXPH1P58417 271 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms