RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 FOPNLQ96NB1 174 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 NSUN5Q96P11 429 aaKnown RBP26.83■■□□□ 1.89
CPNE1-203ENST00000397442 ELAC2Q9BQ52 826 aaKnown RBP26.83■■□□□ 1.89
CPNE1-203ENST00000397442 TMEM79Q9BSE2 394 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 CAAP1Q9H8G2 361 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 ARL15Q9NXU5 204 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 PSMD13Q9UNM6 376 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 DGKBQ9Y6T7 804 aa26.83■■□□□ 1.89
CPNE1-203ENST00000397442 NDUFAB1O14561 156 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 C1orf105O95561 183 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HSPA4LO95757 839 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 S100BP04271 92 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 RPL10P27635 214 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 BDKRB1P46663 353 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 AP1S2P56377 157 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 RACK1P63244 317 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 EIF2B5Q13144 721 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 PCBP2Q15366 365 aaKnown RBP eCLIP26.82■■□□□ 1.885e-8■■□□□ 12.6
CPNE1-203ENST00000397442 MFSD2AQ8NA29 543 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 FBXO15Q8NCQ5 510 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 DNASE2BQ8WZ79 361 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 EGFL8Q99944 293 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 TRIM54Q9BYV2 358 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 WDR37Q9Y2I8 494 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 CATP04040 527 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 ANXA5P08758 320 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HIST1H2AGP0C0S8 130 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HIST1H2ADP20671 130 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 CD38P28907 300 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 CSTF1Q05048 431 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 CAPRIN2Q6IMN6 1127 aaKnown RBP26.82■■□□□ 1.88
CPNE1-203ENST00000397442 LAYNQ6UX15 382 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 LONP2Q86WA8 852 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 CRLF3Q8IUI8 442 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 UBTD2Q8WUN7 234 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 GRAMD1AQ96CP6 724 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HIST1H2AHQ96KK5 128 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HIST1H2AJQ99878 128 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 H2AFJQ9BTM1 129 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 WWP1Q9H0M0 922 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 TMEM168Q9H0V1 697 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 OSGEPL1Q9H4B0 414 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 TM9SF3Q9HD45 589 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 HAO1Q9UJM8 370 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 PCTPQ9UKL6 214 aa26.82■■□□□ 1.88
CPNE1-203ENST00000397442 E2F3O00716 465 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 SNX3O60493 162 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 TGDSO95455 350 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 CLCNKAP51800 687 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 CDH13P55290 713 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 CTBSQ01459 385 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 SF3A3Q12874 501 aaKnown RBP eCLIP26.81■■□□□ 1.883e-8■■■□□ 16.9
CPNE1-203ENST00000397442 ANKS6Q68DC2 871 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 UNC5DQ6UXZ4 953 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 HID1Q8IV36 788 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 ZNF781Q8N8C0 355 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 DTWD2Q8NBA8 298 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 ZNF483Q8TF39 744 aaPredicted RBP26.81■■□□□ 1.88
CPNE1-203ENST00000397442 KLF15Q9UIH9 416 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 THADAQ6YHU6 1953 aa26.81■■□□□ 1.88
CPNE1-203ENST00000397442 UBFD1O14562 309 aaKnown RBP26.8■■□□□ 1.88
CPNE1-203ENST00000397442 GALNT1Q10472 559 aaPredicted RBP26.8■■□□□ 1.88
CPNE1-203ENST00000397442 LRP8Q14114 963 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 IQCHQ86VS3 1027 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 CCL4L1Q8NHW4 92 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 PPP4R1Q8TF05 950 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 THOC1Q96FV9 657 aaKnown RBP26.8■■□□□ 1.88
CPNE1-203ENST00000397442 TRMOQ9BU70 441 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 MIR1-1HGQ9H1L0 117 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 ZBTB26Q9HCK0 441 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 PNPOQ9NVS9 261 aa26.8■■□□□ 1.88
CPNE1-203ENST00000397442 TRNAU1APQ9NX07 287 aaKnown RBP26.8■■□□□ 1.88
CPNE1-203ENST00000397442 TNPO3Q9Y5L0 923 aaKnown RBP26.8■■□□□ 1.88
CPNE1-203ENST00000397442 PPP6CO00743 305 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 TSPAN8P19075 237 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 MPSTP25325 297 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 MAP4P27816 1152 aaKnown RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 GGT5P36269 586 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 HSPA7P48741 367 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 DCP2Q8IU60 420 aaKnown RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 TFGQ92734 400 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 SHCBP1LQ9BZQ2 653 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 TCEAL2Q9H3H9 227 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 WWOXQ9NZC7 414 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 MARCOQ9UEW3 520 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 RAP2CQ9Y3L5 183 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 RASGRP1O95267 797 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 SLC35G4P0C7Q5 338 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 IDSP22304 550 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 AK4P27144 223 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 CLCQ05315 142 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 SRSF5Q13243 272 aaKnown RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 ARMCX6Q7L4S7 300 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 SPATA21Q7Z572 469 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 PIWIL2Q8TC59 973 aaKnown RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 PKP4Q99569 1192 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 CD244Q9BZW8 370 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 ILKAPQ9H0C8 392 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-203ENST00000397442 TNFRSF12AQ9NP84 129 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 NPHS2Q9NP85 383 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms