RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CDC7O00311 574 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 BTN3A1O00481 513 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 SIGLEC6O43699 453 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 GDF9O60383 454 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 XRCC1P18887 633 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 KRT4P19013 534 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 CCNFP41002 786 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 MAZP56270 477 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC14A1Q13336 389 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 SH2D5Q6ZV89 423 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC9B2Q86UD5 537 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 ARL10Q8N8L6 244 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 GPR156Q8NFN8 814 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 ASB11Q8WXH4 323 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 TRIT1Q9H3H1 467 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 CPNE7Q9UBL6 633 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 ZNF292O60281 2723 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 WDR87Q6ZQQ6 2873 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 FLRT2O43155 660 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 ZBTB14O43829 449 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 OPA1O60313 960 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 PSIP1O75475 530 aaKnown RBP23■■□□□ 1.27
TSPAN4-203ENST00000397397 TOP3BO95985 862 aaKnown RBP23■■□□□ 1.27
TSPAN4-203ENST00000397397 VIPP01282 170 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 RPN2P04844 631 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 C8GP07360 202 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 GRK6P43250 576 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 C14orf28Q4W4Y0 310 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 TNFAIP8L3Q5GJ75 292 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 KLC3Q6P597 504 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 DBX2Q6ZNG2 339 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 UBE2R2Q712K3 238 aaPredicted RBP23■■□□□ 1.27
TSPAN4-203ENST00000397397 CLEC14AQ86T13 490 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC35F3Q8IY50 421 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 ARL14Q8N4G2 192 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 GOLGA6L1Q8N7Z2 621 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 OR5AR1Q8NGP9 310 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 SETD7Q8WTS6 366 aaKnown RBP23■■□□□ 1.27
TSPAN4-203ENST00000397397 MVB12BQ9H7P6 319 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 SENP1Q9P0U3 644 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 ADAMTS6Q9UKP5 1117 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 BTBD3Q9Y2F9 522 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 COLEC10Q9Y6Z7 277 aa23■■□□□ 1.27
TSPAN4-203ENST00000397397 PRAMEF33A0A0G2JMD5 474 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 GFYI3L273 518 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 C1orf105O95561 183 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 CATP04040 527 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 CD59P13987 128 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TFEBP19484 476 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 BDKRB1P46663 353 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 GLRBP48167 497 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 UBE2IP63279 158 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC18A2Q05940 514 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 BIRC2Q13490 618 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TSNQ15631 228 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TSNAXIP1Q2TAA8 658 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 C17orf82Q86X59 251 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TBC1D21Q8IYX1 336 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SMC6Q96SB8 1091 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 STN1Q9H668 368 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 POT1Q9NUX5 634 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 ZNF358Q9NW07 568 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 NOVA2Q9UNW9 492 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 ARHGEF33A8MVX0 844 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 COPEO14579 308 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC16A5O15375 505 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 CYP2A7P20853 494 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 MAP4P27816 1152 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 NDUFS1P28331 727 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 HHEXQ03014 270 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 PRKG2Q13237 762 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SP140Q13342 867 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 AGBL2Q5U5Z8 902 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TTC23LQ6PF05 361 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 EXOC3L1Q86VI1 746 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 RASGRP3Q8IV61 690 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 FAM181AQ8N9Y4 354 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 AVL9Q8NBF6 648 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 OR5K2Q8NHB8 316 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 ARL8AQ96BM9 186 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 PTERQ96BW5 349 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SCYL1Q96KG9 808 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 APOLD1Q96LR9 279 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 GPR78Q96P69 363 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 SH3GL2Q99962 352 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 HGH1Q9BTY7 390 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TFB2MQ9H5Q4 396 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 ALG9Q9H6U8 611 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 DCDC2Q9UHG0 476 aa22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 TDRKHQ9Y2W6 561 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 ARID1BQ8NFD5 2236 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-203ENST00000397397 LAMA1P25391 3075 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 ATP8B1O43520 1251 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 GSTA1P08263 222 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 MYF5P13349 255 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 RPIAP49247 311 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 ACAP2Q15057 778 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 NR0B2Q15466 257 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 OR4D1Q15615 310 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 STPG1Q5TH74 334 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms