RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ZNF658BQ4V348 819 aaPredicted RBP15.82■□□□□ 0.12
CLTA-203ENST00000396603 ZNF789Q5FWF6 425 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ANKRD20A2Q5SQ80 823 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 FHL5Q5TD97 284 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ANKRD20A1Q5TYW2 823 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ANKRD20A3Q5VUR7 823 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 CPZQ66K79 652 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ENDOVQ8N8Q3 282 aaKnown RBP15.82■□□□□ 0.12
CLTA-203ENST00000396603 GLIS1Q8NBF1 620 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 OR4E2Q8NGC2 313 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 PBKQ96KB5 322 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 OR52A5Q9H2C5 316 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 COG4Q9H9E3 785 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ACTR5Q9H9F9 607 aaPredicted RBP15.82■□□□□ 0.12
CLTA-203ENST00000396603 LRRC4CQ9HCJ2 640 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 HOMER3Q9NSC5 361 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 PCMTD2Q9NV79 361 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 ZDHHC3Q9NYG2 299 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 PYCARDQ9ULZ3 195 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 PADI2Q9Y2J8 665 aa15.82■□□□□ 0.12
CLTA-203ENST00000396603 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLTA-203ENST00000396603 SLC9B1P1A6NJY1 282 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 C2orf74A8MZ97 194 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 F5H423 210 aaPredicted RBP15.81■□□□□ 0.12
CLTA-203ENST00000396603 CEP104O60308 925 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 AP2A2O94973 939 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 IGHEP01854 428 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 CYP2A7P20853 494 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 PTGIRP43119 386 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 PREPP48147 710 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 ABRQ12979 859 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 PTPRCAPQ14761 206 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 AADACL2Q6P093 401 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 FAM198BQ6UWH4 519 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 SYTL1Q8IYJ3 562 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 SLC35F6Q8N357 371 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.81■□□□□ 0.12
CLTA-203ENST00000396603 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
CLTA-203ENST00000396603 CLIP3Q96DZ5 547 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 RNF31Q96EP0 1072 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 SPATA13Q96N96 652 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 C5AR2Q9P296 337 aa15.81■□□□□ 0.12
CLTA-203ENST00000396603 USP9XQ93008 2570 aaPredicted RBP15.81■□□□□ 0.12
CLTA-203ENST00000396603 GSAPA4D1B5 854 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 BLACEA4D250 179 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 C9J4A7 227 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 E7EQ34 232 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 LDB2O43679 373 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 POLBP06746 335 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 CAPN1P07384 714 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 AGXTP21549 392 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 ACRV1P26436 265 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 PSMB4P28070 264 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 CCL11P51671 97 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 ITGA1P56199 1179 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 GNG11P61952 73 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 NCF4Q15080 339 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 DENND5AQ6IQ26 1287 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 AMIGO1Q86WK6 493 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 RAB43Q86YS6 212 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 OR13C4Q8NGS5 318 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 OR1L3Q8NH93 324 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 FERD3LQ96RJ6 166 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 SMAD5Q99717 465 aaKnown RBP15.8■□□□□ 0.12
CLTA-203ENST00000396603 TBL1YQ9BQ87 522 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 AP1M2Q9Y6Q5 423 aa15.8■□□□□ 0.12
CLTA-203ENST00000396603 TMEM150CB9EJG8 249 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 BTN3A1O00481 513 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 CES2O00748 559 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 LIN7AO14910 233 aaPredicted RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 KCNN4O15554 427 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 FGGP02679 453 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 TCP1P17987 556 aaKnown RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 STIP1P31948 543 aaKnown RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 PLOD1Q02809 727 aaPredicted RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 BOP1Q14137 746 aaKnown RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 GPR135Q8IZ08 494 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 LILRA3Q8N6C8 439 aaPredicted RBP15.79■□□□□ 0.12
CLTA-203ENST00000396603 OR52E1Q8NGJ3 308 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 PNPLA2Q96AD5 504 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 TRAPPC9Q96Q05 1148 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 SLC29A3Q9BZD2 475 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 SLC7A5P2Q9GIP4 190 aa15.79■□□□□ 0.12
CLTA-203ENST00000396603 NBPF19A0A087WUL8 3843 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 BTN3A3O00478 584 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 KDM1AO60341 852 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 AGFG2O95081 481 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 ST6GAL1P15907 406 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 PSMA3P25788 255 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 MC4RP32245 332 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 SHMT2P34897 504 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 NSG1P42857 185 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 ITIH4Q14624 930 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 CCNG2Q16589 344 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 NADK2Q4G0N4 442 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 ZNF385CQ66K41 422 aaPredicted RBP15.78■□□□□ 0.12
CLTA-203ENST00000396603 JMJD6Q6NYC1 403 aaPredicted RBP15.78■□□□□ 0.12
CLTA-203ENST00000396603 SPESP1Q6UW49 350 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 SLC35B2Q8TB61 432 aa15.78■□□□□ 0.12
CLTA-203ENST00000396603 PROKR1Q8TCW9 393 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms