RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RHDQ02161 417 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 PRKG2Q13237 762 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 EIF4HQ15056 248 aaKnown RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 SYTL3Q4VX76 610 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 IL23RQ5VWK5 629 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 CYP20A1Q6UW02 462 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 RAVER1Q8IY67 606 aaKnown RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 ASZ1Q8WWH4 475 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 GLYATL1Q969I3 302 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 ZFYVE19Q96K21 471 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 ACTR8Q9H981 624 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 COPS7BQ9H9Q2 264 aaPredicted RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 RNF11Q9Y3C5 154 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 CCL27Q9Y4X3 112 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 ZFC3H1O60293 1989 aaKnown RBP14.62□□□□□ -0.07
CBX3-202ENST00000396386 C15orf38-AP3S2A0A0A6YYH1 394 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 TCRBV3S1A0A5B6 114 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 LOC730098B7Z3J9 87 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 PRRT4C9JH25 899 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 ULK1O75385 1050 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 KRT6AP02538 564 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 KRT6BP04259 564 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 GSTM1P09488 218 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 G6PDP11413 515 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 SLC6A2P23975 617 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 ITGB7P26010 798 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 IL12AP29459 219 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 SLC6A12P48065 614 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 KRT6CP48668 564 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 GSTM4Q03013 218 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 IMPG1Q17R60 797 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 GAB4Q2WGN9 574 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 ARPINQ7Z6K5 226 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 DHFR2Q86XF0 187 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 SLC15A3Q8IY34 581 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 PROKR1Q8TCW9 393 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 MCOLN3Q8TDD5 553 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 OR8D1Q8WZ84 308 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 USP7Q93009 1102 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 AP2M1Q96CW1 435 aa14.62□□□□□ -0.07
CBX3-202ENST00000396386 DUS3LQ96G46 650 aaKnown RBP14.62□□□□□ -0.07
CBX3-202ENST00000396386 ZNF490Q9ULM2 529 aaPredicted RBP14.62□□□□□ -0.07
CBX3-202ENST00000396386 EIF3LQ9Y262 564 aaKnown RBP14.62□□□□□ -0.07
CBX3-202ENST00000396386 CEP290O15078 2479 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 OR2AG2A6NM03 316 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 HEPACAM2A8MVW5 462 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 H0Y858 1186 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 GFYI3L273 518 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 IFRD1O00458 451 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 WNT9AO14904 365 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ATG13O75143 517 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 SLC2A4P14672 509 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 JAK1P23458 1154 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 SLC6A11P48066 632 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 GRIN2CQ14957 1233 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 PDGFRLQ15198 375 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 TLR1Q15399 786 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 HNRNPA1L2Q32P51 320 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 GGTA1PQ4G0N0 100 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 C9orf50Q5SZB4 431 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ZNF648Q5T619 568 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 GET4Q7L5D6 327 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 TRIM46Q7Z4K8 759 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 GALNT13Q8IUC8 556 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 BEND7Q8N7W2 519 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 ICA1LQ8NDH6 482 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 UCMAQ8WVF2 138 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 FGF13Q92913 245 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 GLMNQ92990 594 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 DTD2Q96FN9 168 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 NR1H4Q96RI1 486 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 PKP2Q99959 881 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 FAM83CQ9BQN1 747 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 MUC13Q9H3R2 512 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 DZANK1Q9NVP4 752 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 CMTM6Q9NX76 183 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 OBP2AQ9NY56 170 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 PCDHA9Q9Y5H5 950 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 DNAJA2O60884 412 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 SLCO2B1O94956 709 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 NPPAP01160 153 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 EPORP19235 508 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ATP6V1B2P21281 511 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 CASP2P42575 452 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 PRLHRP49683 370 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ELP6Q0PNE2 266 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 MESP2Q0VG99 397 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ELAVL3Q14576 367 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 PAGE3Q5JUK9 113 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 HABP4Q5JVS0 413 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 CYP2R1Q6VVX0 501 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 RASGRP3Q8IV61 690 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 LILRA2Q8N149 483 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 TMIEQ8NEW7 156 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ADCY4Q8NFM4 1077 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 VN1R2Q8NFZ6 395 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 OR2T34Q8NGX1 318 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms