RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 OR4L1Q8NH43 312 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ABHD17AQ96GS6 310 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 TRAPPC9Q96Q05 1148 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 TWSG1Q9GZX9 223 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ACTL8Q9H568 366 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 C1GALT1Q9NS00 363 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 PAK5Q9P286 719 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 KCND3Q9UK17 655 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 TCAF1Q9Y4C2 921 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 PCDHGA6Q9Y5G7 932 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ASH1LQ9NR48 2969 aaKnown RBP17.75■□□□□ 0.43
FXN-203ENST00000396366 SLC5A10A0PJK1 596 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 IQCF5A8MTL0 148 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 K7EM74 188 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 FGGP02679 453 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 FTH1P02794 183 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 GSTM1P09488 218 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 CXCR5P32302 372 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 GSTM4Q03013 218 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 ABRQ12979 859 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 AFTPHQ6ULP2 937 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 UNC5AQ6ZN44 842 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 ATG14Q6ZNE5 492 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 TRIM73Q86UV7 250 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 LRRC8AQ8IWT6 810 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 CARFQ8N187 725 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 C9orf43Q8TAL5 461 aaPredicted RBP17.74■□□□□ 0.43
FXN-203ENST00000396366 LKAAEAR1Q8TD35 194 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 MR1Q95460 341 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 PITPNM3Q9BZ71 974 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 SPHK1Q9NYA1 384 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 ACTR10Q9NZ32 417 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 MARCH4Q9P2E8 410 aaPredicted RBP17.74■□□□□ 0.43
FXN-203ENST00000396366 TUBD1Q9UJT1 453 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 PLAGL1Q9UM63 463 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 ASF1AQ9Y294 204 aa17.74■□□□□ 0.43
FXN-203ENST00000396366 DRG1Q9Y295 367 aaKnown RBP17.74■□□□□ 0.43
FXN-203ENST00000396366 TMEM150CB9EJG8 249 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 CPNE3O75131 537 aaKnown RBP17.73■□□□□ 0.43
FXN-203ENST00000396366 WISP1O95388 367 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 CCDC175P0C221 793 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 OR56A5P0C7T3 313 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 CCR7P32248 378 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 SESN2P58004 480 aaPredicted RBP17.73■□□□□ 0.43
FXN-203ENST00000396366 ZNF789Q5FWF6 425 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 FAM69BQ5VUD6 431 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 VRK3Q8IV63 474 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 LMNTD1Q8N9Z9 388 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 RIMKLBQ9ULI2 386 aa17.73■□□□□ 0.43
FXN-203ENST00000396366 TDRKHQ9Y2W6 561 aaKnown RBP17.73■□□□□ 0.43
FXN-203ENST00000396366 UBR5O95071 2799 aaPredicted RBP17.72■□□□□ 0.43
FXN-203ENST00000396366 C2orf74A8MZ97 194 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 C21orf140B9A014 251 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 MATN2O00339 956 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 HCRTR1O43613 425 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 NR1D1P20393 614 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 TERF1P54274 439 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 CCZ1BP86790 482 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 CCZ1P86791 482 aaPredicted RBP17.72■□□□□ 0.43
FXN-203ENST00000396366 KCNC4Q03721 635 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 LAMB3Q13751 1172 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 SYTL3Q4VX76 610 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 FASTKD1Q53R41 847 aaKnown RBP17.72■□□□□ 0.43
FXN-203ENST00000396366 PLEKHS1Q5SXH7 462 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 LYPLAL1Q5VWZ2 237 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 ZNF662Q6ZS27 426 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 CDHR3Q6ZTQ4 885 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 KRT222Q8N1A0 295 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 PPHLN1Q8NEY8 458 aaKnown RBP17.72■□□□□ 0.43
FXN-203ENST00000396366 OR8K5Q8NH50 307 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 FLVCR1-AS1Q8TAF5 88 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.72■□□□□ 0.43
FXN-203ENST00000396366 OR2A14Q96R47 310 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 CHST8Q9H2A9 424 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 FAM60AQ9NP50 221 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 CIDEBQ9UHD4 219 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 POLHQ9Y253 713 aa17.72■□□□□ 0.43
FXN-203ENST00000396366 TCRBV7S3A2A0A539 114 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 QSOX1O00391 747 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 CEP104O60308 925 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 DNAJB5O75953 348 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 UGT2B7P16662 529 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 PTPN4P29074 926 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 PRAMEP78395 509 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 BASP1P80723 227 aaKnown RBP17.71■□□□□ 0.43
FXN-203ENST00000396366 IL10RAQ13651 578 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 ZIC1Q15915 447 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 PCID2Q5JVF3 399 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 DRICH1Q6PGQ1 229 aaPredicted RBP17.71■□□□□ 0.43
FXN-203ENST00000396366 SPESP1Q6UW49 350 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 CES3Q6UWW8 571 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 ZNF517Q6ZMY9 492 aaPredicted RBP17.71■□□□□ 0.43
FXN-203ENST00000396366 NLRP9Q7RTR0 991 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 GSTA5Q7RTV2 222 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 TBC1D21Q8IYX1 336 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 LATS2Q9NRM7 1088 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 CDYLQ9Y232 598 aa17.71■□□□□ 0.43
FXN-203ENST00000396366 FARSAQ9Y285 508 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms