RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RABGGTBP53611 331 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 NME5P56597 212 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TRAP1Q12931 704 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 TRAF2Q12933 501 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TRIM25Q14258 630 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 FAM83EQ2M2I3 478 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TMEM52BQ4KMG9 183 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 BCL7AQ4VC05 210 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PERM1Q5SV97 790 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 LDLRAP1Q5SW96 308 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TTC33Q6PID6 262 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 SNX20Q7Z614 316 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 RAB44Q7Z6P3 723 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 CEP97Q8IW35 865 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CELF5Q8N6W0 485 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 CELF2-AS1Q8N7Q2 184 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF781Q8N8C0 355 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PLPP7Q8NBV4 271 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 BHMTQ93088 406 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF764Q96H86 408 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 SH3YL1Q96HL8 342 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 CIB1Q99828 191 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SLC46A2Q9BY10 475 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 HOXD1Q9GZZ0 328 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PRO3102Q9H379 93 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MUC13Q9H3R2 512 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 RMND5AQ9H871 391 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SFXN1Q9H9B4 322 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 EML4Q9HC35 981 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 AKIP1Q9NQ31 210 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TCF7L2Q9NQB0 619 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ASAH2Q9NR71 780 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CATSPERZQ9NTU4 200 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 NUDT4Q9NZJ9 180 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PCDHGA8Q9Y5G5 932 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 A0A0D9SEW6 157 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TYW5A2RUC4 315 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 BBIP1A8MTZ0 92 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 ARNTLO00327 626 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 KPNA5O15131 536 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TRIM24O15164 1050 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 KMOO15229 486 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 DLX3O60479 287 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SEC14L2O76054 403 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 IPO13O94829 963 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 MYO1DO94832 1006 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 VAPBO95292 243 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 GLP2RO95838 553 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TBX18O95935 607 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 UGT2B4P06133 528 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 COL9A1P20849 921 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MATN1P21941 496 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 FCARP24071 287 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MPSTP25325 297 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TYK2P29597 1187 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SESN2P58004 480 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 PRKCQQ04759 706 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF846Q147U1 533 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PDGFRLQ15198 375 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF678Q5SXM1 525 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 GPRC6AQ5T6X5 926 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TMEM207Q6UWW9 146 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MSANTD1Q6ZTZ1 278 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 BTLAQ7Z6A9 289 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ANKRD13BQ86YJ7 626 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PLD6Q8N2A8 252 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF786Q8N393 782 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TCAIMQ8N3R3 496 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 OR7G1Q8NGA0 311 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 OR2AP1Q8NGE2 309 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 DNAJB8Q8NHS0 232 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PNPT1Q8TCS8 783 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 OSCP1Q8WVF1 389 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 WBP2Q969T9 261 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CELF6Q96J87 481 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 YTHDF1Q9BYJ9 559 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 MOV10Q9HCE1 1003 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZBTB26Q9HCK0 441 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ARMC1Q9NVT9 282 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 INTS6Q9UL03 887 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 PCDHGA7Q9Y5G6 932 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 C1orf232A0A0U1RR37 186 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SYCE1LA8MT33 242 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CENPBD1B2RD01 187 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CLDN25C9JDP6 229 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 NUAK1O60285 661 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 KRT75O95678 551 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 POP4O95707 220 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 BCL10O95999 233 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 GOT2P00505 430 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 CHRNB1P11230 501 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ENO3P13929 434 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 OPRL1P41146 370 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CASP2P42575 452 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 RPL14P50914 215 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 ARFIP1P53367 373 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CCL23P55773 120 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms