RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 MCM5P33992 734 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 HOXD13P35453 343 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 FOLR3P41439 243 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 TNNT3P45378 269 aaPredicted RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 RPS7P62081 194 aaKnown RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 CCL7P80098 99 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 FOLH1Q04609 750 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 BECN1Q14457 450 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 PDIA5Q14554 519 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 TSTQ16762 297 aaKnown RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 LIN54Q6MZP7 749 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 MTFR2Q6P444 385 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 VSTM1Q6UX27 236 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 CHD1LQ86WJ1 897 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 CATSPER3Q86XQ3 398 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ARL6IP6Q8N6S5 226 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 OR6B3Q8NGW1 331 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 NCOA7Q8NI08 942 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 EID2BQ96D98 161 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 SNX22Q96L94 193 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 COG8Q96MW5 612 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 RANBP9Q96S59 729 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ACBD6Q9BR61 282 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 DDA1Q9BW61 102 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 CALN1Q9BXU9 219 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 NACA2Q9H009 215 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 AGPAT4Q9NRZ5 378 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 INTS13Q9NVM9 706 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 PIH1D1Q9NWS0 290 aaKnown RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 TMEM160Q9NX00 188 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 JKAMPQ9P055 326 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 COPG1Q9Y678 874 aaKnown RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ANAPC1Q9H1A4 1944 aa5.4□□□□□ -1.55
AP3S1-202ENST00000395548 CYP3A7-CYP3A51PA0A087WV96 503 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 FAM234BA2RU67 622 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CCDC151A5D8V7 595 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 AP3D1O14617 1153 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 YY2O15391 372 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 COCHO43405 550 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ZFPL1O95159 310 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 IFNA2P01563 188 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 IGLV2-14P01704 120 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 IGHDP01880 384 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 RPLP0P05388 317 aaKnown RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 IRF1P10914 325 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 MX1P20591 662 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CYP3A7P24462 503 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 NFKBIAP25963 317 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ABCD1P33897 745 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ADPRHP54922 357 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 NOP14P78316 857 aaKnown RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 DRAP1Q14919 205 aaPredicted RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 RASA2Q15283 850 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CST6Q15828 149 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ZBTB6Q15916 424 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 DEFB133Q30KQ1 61 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF362Q5T0B9 420 aaPredicted RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 PAPD7Q5XG87 772 aaKnown RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 WSCD1Q658N2 575 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 RINT1Q6NUQ1 792 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 RNF44Q7L0R7 432 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 FJX1Q86VR8 437 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 BRSK2Q8IWQ3 736 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SLC35F3Q8IY50 421 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 OR8H1Q8NGG4 311 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ETNPPLQ8TBG4 499 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 MGARPQ8TDB4 240 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ITLN2Q8WWU7 325 aaPredicted RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 OVCA2Q8WZ82 227 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SNX21Q969T3 373 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 NMD3Q96D46 503 aaKnown RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 PPP1R13BQ96KQ4 1090 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 IFT74Q96LB3 600 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SMR3AQ99954 134 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SLC2A11Q9BYW1 496 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 GPR63Q9BZJ6 419 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SPRTNQ9H040 489 aaPredicted RBP5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ZMYND12Q9H0C1 365 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 LRRN3Q9H3W5 708 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 MLXIPLQ9NP71 852 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 NECTIN3Q9NQS3 549 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 PLK2Q9NYY3 685 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 RGL1Q9NZL6 768 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 CYTH4Q9UIA0 394 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF711Q9Y462 761 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 TNFRSF18Q9Y5U5 241 aa5.39□□□□□ -1.55
AP3S1-202ENST00000395548 SCN8AQ9UQD0 1980 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 RP1P56715 2156 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 LOC101059948A0A1B0GTJ6 334 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 MID1O15344 667 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PTP4A3O75365 173 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SLC43A1O75387 559 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 LYPLA2O95372 231 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms