RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RIPK1Q13546 671 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NAA25Q14CX7 972 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 TTC23LQ6PF05 361 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 CHCHD4Q8N4Q1 142 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 DEFB119Q8N690 84 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 CADM4Q8NFZ8 388 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 TRPC4APQ8TEL6 797 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NSUN5Q96P11 429 aaKnown RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NUSAP1Q9BXS6 441 aaKnown RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 PCED1AQ9H1Q7 454 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 PTBP2Q9UKA9 531 aaKnown RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 SDK1Q7Z5N4 2213 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 B2RBV5 119 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 E2F3O00716 465 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 ESRRBO95718 433 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 IGHV4-34P06331 123 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 C8GP07360 202 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 TSPAN8P19075 237 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 CNR2P34972 360 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 PKNOX1P55347 436 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 FGL2Q14314 439 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 DNAL1Q4LDG9 190 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 SULT1C3Q6IMI6 304 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 RINLQ6ZS11 566 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 CHSY3Q70JA7 882 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 ZBTB44Q8NCP5 570 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 UBTD2Q8WUN7 234 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 NAT14Q8WUY8 206 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 UTP4Q969X6 686 aaKnown RBP18.88■□□□□ 0.61
LMNB1-202ENST00000395354 BIRC7Q96CA5 298 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 ZNF382Q96SR6 550 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 HGH1Q9BTY7 390 aa18.88■□□□□ 0.61
LMNB1-202ENST00000395354 MMADHCQ9H3L0 296 aaPredicted RBP18.88■□□□□ 0.61
LMNB1-202ENST00000395354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 METTL12A8MUP2 240 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SLC16A5O15375 505 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SLC31A1O15431 190 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 GSC2O15499 205 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 LATO43561 262 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SGTAO43765 313 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SKAP2O75563 359 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-202ENST00000395354 AGTR2P50052 363 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 CDKL1Q00532 357 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SP140Q13342 867 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 AGERQ15109 404 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 FBXW10Q5XX13 1052 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 C11orf74Q86VG3 221 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 PHYKPLQ8IUZ5 450 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 TMEFF1Q8IYR6 380 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 ARHGAP24Q8N264 748 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 PELI3Q8N2H9 469 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 ASB12Q8WXK4 309 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 NUS1Q96E22 293 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 MIPEPQ99797 713 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 SEMA4BQ9NPR2 832 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-202ENST00000395354 PFDN4Q9NQP4 134 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 KLC4Q9NSK0 619 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 ADAMTS6Q9UKP5 1117 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-202ENST00000395354 FIS1Q9Y3D6 152 aa18.87■□□□□ 0.61
LMNB1-202ENST00000395354 GIPC1O14908 333 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 VPS4BO75351 444 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 THRAP10827 490 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 IRX1P78414 480 aaPredicted RBP18.86■□□□□ 0.61
LMNB1-202ENST00000395354 HERC3Q15034 1050 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 CLEC6AQ6EIG7 209 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 DET1Q7L5Y6 550 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 ASZ1Q8WWH4 475 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 FOXJ1Q92949 421 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 C19orf60Q96EN9 201 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 PPP1R36Q96LQ0 422 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 CCT7Q99832 543 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 C1QTNF7Q9BXJ2 289 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 CADM1Q9BY67 442 aaKnown RBP18.86■□□□□ 0.61
LMNB1-202ENST00000395354 ZCCHC2Q9C0B9 1178 aaKnown RBP18.86■□□□□ 0.61
LMNB1-202ENST00000395354 DUSP15Q9H1R2 295 aaPredicted RBP18.86■□□□□ 0.61
LMNB1-202ENST00000395354 ZBTB26Q9HCK0 441 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 UTP6Q9NYH9 597 aaKnown RBP18.86■□□□□ 0.61
LMNB1-202ENST00000395354 PCDHGA2Q9Y5H1 932 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 DNAJC15Q9Y5T4 150 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 CACNA1HO95180 2353 aa18.86■□□□□ 0.61
LMNB1-202ENST00000395354 UROSP10746 265 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 KHDC1Q4VXA5 237 aaKnown RBP18.85■□□□□ 0.61
LMNB1-202ENST00000395354 LPCAT2Q7L5N7 544 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 TCAIMQ8N3R3 496 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 TWIST2Q8WVJ9 160 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 SLC12A9Q9BXP2 914 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 TRIM54Q9BYV2 358 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 EBF2Q9HAK2 575 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 EIF2B4Q9UI10 523 aaKnown RBP18.85■□□□□ 0.61
LMNB1-202ENST00000395354 PPP6CO00743 305 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 GPC4O75487 556 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 CRCPO75575 148 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 SLCO2B1O94956 709 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 CHEK2O96017 543 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 COX4I1P13073 169 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 EZRP15311 586 aaKnown RBP18.85■□□□□ 0.61
LMNB1-202ENST00000395354 PIK3R1P27986 724 aa18.85■□□□□ 0.61
LMNB1-202ENST00000395354 MAPK9P45984 424 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms