RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 CDK3Q00526 305 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 SMARCD3Q6STE5 483 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 RTL4Q6ZR62 310 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ZC3HC1Q86WB0 502 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 LMAN2LQ9H0V9 348 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ETNK2Q9NVF9 386 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 A0A096LPI6 279 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ELOVL7A1L3X0 281 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 MTA2O94776 668 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 CDK1P06493 297 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 CCR1P32246 355 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 STXBP1P61764 594 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 PPP3R1P63098 170 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 GRAPQ13588 217 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ZNF404Q494X3 552 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 LINC00471Q8N535 108 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 GDPD1Q8N9F7 314 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 GRAPLQ8TC17 118 aaPredicted RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 PANX1Q96RD7 426 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 USP29Q9HBJ7 922 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 SEMA3GQ9NS98 782 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 MAGI2Q86UL8 1455 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ACOX3O15254 700 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 SLC7A1P30825 629 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 ABCA11PQ4W5N1 156 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 DUPD1Q68J44 220 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 HIST2H3AQ71DI3 136 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 TRABD2AQ86V40 505 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 DEDD2Q8WXF8 326 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 SLC5A5Q92911 643 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 TMEM176AQ96HP8 235 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 CIB1Q99828 191 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 ADAM18Q9Y3Q7 739 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 QRICH2Q9H0J4 1663 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 CARNS1A5YM72 827 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 BCAS1O75363 584 aaPredicted RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 SCELO95171 688 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 AXLP30530 894 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ZC3H14Q6PJT7 736 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 AHSA2Q719I0 299 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 LIX1LQ8IVB5 337 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 ZNF578Q96N58 590 aaPredicted RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 WRAP53Q9BUR4 548 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 SLC38A1Q9H2H9 487 aa8.93□□□□□ -0.98
CHD2-201ENST00000394196 RPL36Q9Y3U8 105 aaKnown RBP8.93□□□□□ -0.98
CHD2-201ENST00000394196 A0A0A0MRY4 1105 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 JCHAINP01591 159 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CFL1P23528 166 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 DNASE1P24855 282 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 EPHA10Q5JZY3 1008 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CPSF7Q8N684 471 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 KLHDC1Q8N7A1 406 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 SPATA13Q96N96 652 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 OR52E6Q96RD3 313 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 ELL3Q9HB65 397 aaPredicted RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 NUMA1Q14980 2115 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 OR1I1O60431 355 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 MTX2O75431 263 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 C7P10643 843 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CCNFP41002 786 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 TLE2Q04725 743 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 ZNF33BQ06732 778 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 ZNF705AQ6ZN79 300 aaPredicted RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 TMED4Q7Z7H5 227 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 SLC6A16Q9GZN6 736 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 POLR1EQ9GZS1 481 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 GLTPQ9NZD2 209 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 SLC27A6Q9Y2P4 619 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CATP04040 527 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 CYP4B1P13584 511 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 MC3RP41968 323 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 ELOAQ14241 798 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 ACOX1Q15067 660 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 METTL2BQ6P1Q9 378 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 BRINP3Q76B58 766 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 PPP1R16AQ96I34 528 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 STXBP5LQ9Y2K9 1186 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 PLLPQ9Y342 182 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 HGFP14210 728 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CHRNB2P17787 502 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 ETV6P41212 452 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 USP49Q70CQ1 688 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 GRAMD2AQ8IUY3 354 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 CPNE9Q8IYJ1 553 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 SLC44A1Q8WWI5 657 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 MRPS31Q92665 395 aaKnown RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 VRK1Q99986 396 aaPredicted RBP8.92□□□□□ -0.98
CHD2-201ENST00000394196 NKIRAS2Q9NYR9 191 aa8.92□□□□□ -0.98
CHD2-201ENST00000394196 MRTO4Q9UKD2 239 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms