RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ASIC3Q9UHC3 531 aa29.85■■■□□ 2.37
CMTM4-202ENST00000394106 ERVH48-1M5A8F1 160 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 ZBTB11O95625 1053 aaPredicted RBP29.84■■■□□ 2.37
CMTM4-202ENST00000394106 DLGAP3O95886 979 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 APOA4P06727 396 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 FGF5P12034 268 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 TMED2Q15363 201 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 ARMC3Q5W041 872 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 PAPD7Q5XG87 772 aaKnown RBP29.84■■■□□ 2.37
CMTM4-202ENST00000394106 LRRC6Q86X45 466 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 PPP1R3BQ86XI6 285 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 VRK3Q8IV63 474 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 PPIL6Q8IXY8 311 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 TBC1D21Q8IYX1 336 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 SLC22A15Q8IZD6 547 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 NAT8LQ8N9F0 302 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 IL1RAPL1Q9NZN1 696 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 POLG2Q9UHN1 485 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 RARRES3Q9UL19 164 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 ICKQ9UPZ9 632 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 MGAQ8IWI9 3026 aa29.84■■■□□ 2.37
CMTM4-202ENST00000394106 LOC400499M0QZD8 3231 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 RPS3P23396 243 aaKnown RBP eCLIP29.83■■■□□ 2.37
CMTM4-202ENST00000394106 AOAHP28039 575 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 ACY1Q03154 408 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 DHX34Q14147 1143 aaKnown RBP29.83■■■□□ 2.37
CMTM4-202ENST00000394106 UNC5BQ8IZJ1 945 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 OR5K2Q8NHB8 316 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 PANX3Q96QZ0 392 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 LNPEPQ9UIQ6 1025 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 CDYLQ9Y232 598 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 MAD1L1Q9Y6D9 718 aa29.83■■■□□ 2.37
CMTM4-202ENST00000394106 FAM237BA0A1B0GVD1 139 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 MAGEB16A2A368 324 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 SLC9B1P1A6NJY1 282 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 PFDN6O15212 129 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 GPC4O75487 556 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 SPAG6O75602 509 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 KIAA0754O94854 1291 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 PRDX3P30048 256 aaKnown RBP29.82■■■□□ 2.36
CMTM4-202ENST00000394106 FMO4P31512 558 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 ABRQ12979 859 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 LARP7Q4G0J3 582 aaKnown RBP eCLIP29.82■■■□□ 2.36
CMTM4-202ENST00000394106 ANKRD20A4Q4UJ75 823 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 RNASEH2BQ5TBB1 312 aaKnown RBP29.82■■■□□ 2.36
CMTM4-202ENST00000394106 ADGRF3Q8IZF5 1079 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 CARFQ8N187 725 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 D2HGDHQ8N465 521 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 CFAP61Q8NHU2 1237 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 SLC39A7Q92504 469 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 KIAA1143Q96AT1 154 aaPredicted RBP29.82■■■□□ 2.36
CMTM4-202ENST00000394106 GPN2Q9H9Y4 310 aaPredicted RBP29.82■■■□□ 2.36
CMTM4-202ENST00000394106 FGF21Q9NSA1 209 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 PLAGL1Q9UM63 463 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 SAR1BQ9Y6B6 198 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 RPS6KL1Q9Y6S9 549 aa29.82■■■□□ 2.36
CMTM4-202ENST00000394106 LOC101059948A0A1B0GTJ6 334 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 CTAGE9A4FU28 777 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 C2orf74A8MZ97 194 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 SHMT2P34897 504 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 PTK6Q13882 451 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 GPR19Q15760 415 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 TYSND1Q2T9J0 566 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 DNAJC21Q5F1R6 531 aaKnown RBP29.81■■■□□ 2.36
CMTM4-202ENST00000394106 TMTC4Q5T4D3 741 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 RNF187Q5TA31 235 aaPredicted RBP29.81■■■□□ 2.36
CMTM4-202ENST00000394106 NEPROQ6NW34 567 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 PCSK4Q6UW60 755 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 C6orf15Q6UXA7 325 aaPredicted RBP29.81■■■□□ 2.36
CMTM4-202ENST00000394106 UNC5AQ6ZN44 842 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 CREG2Q8IUH2 290 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 KLHL7Q8IXQ5 586 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 ESX1Q8N693 406 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 GALNT6Q8NCL4 622 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 GSDMBQ8TAX9 411 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 TTC9Q92623 222 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 C1GALT1Q9NS00 363 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 ACTR10Q9NZ32 417 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 PCYOX1Q9UHG3 505 aa29.81■■■□□ 2.36
CMTM4-202ENST00000394106 TIAF1O95411 115 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 MAGEA3P43357 314 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 CYP4F2P78329 520 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 ABHD18Q0P651 414 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 CTSL3PQ5NE16 218 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 AGGF1Q8N302 714 aaeCLIP29.8■■■□□ 2.36
CMTM4-202ENST00000394106 LPGAT1Q92604 370 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 STAMBPL1Q96FJ0 436 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 TCF12Q99081 682 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 CRYL1Q9Y2S2 319 aa29.8■■■□□ 2.36
CMTM4-202ENST00000394106 PIPSLA2A3N6 862 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 TPBGLP0DKB5 382 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 OGNP20774 298 aaKnown RBP29.79■■■□□ 2.36
CMTM4-202ENST00000394106 PTGIRP43119 386 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 THOC5Q13769 683 aaKnown RBP29.79■■■□□ 2.36
CMTM4-202ENST00000394106 MAP7Q14244 749 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 PWWP2BQ6NUJ5 590 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 OTOAQ7RTW8 1153 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 SLCO2A1Q92959 643 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 BIRC8Q96P09 236 aa29.79■■■□□ 2.36
CMTM4-202ENST00000394106 KLHL25Q9H0H3 589 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms