RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM8A1Q9UBU6 413 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 AP1M2Q9Y6Q5 423 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 NBPF19A0A087WUL8 3843 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 BTNL10A8MVZ5 291 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 LIN7AO14910 233 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 AGXTP21549 392 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 GNLYP22749 145 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 MC4RP32245 332 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 CYLC1P35663 651 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 UQCRFS1P47985 274 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 RWDD2BP57060 319 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 PARP6Q2NL67 630 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 JMJD6Q6NYC1 403 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 DARS2Q6PI48 645 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 ZBTB2Q8N680 514 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 FDCSPQ8NFU4 85 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 CCDC110Q8TBZ0 833 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 NAT14Q8WUY8 206 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 TCTN2Q96GX1 697 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 ACTR10Q9NZ32 417 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 SPTBP11277 2137 aa16.94■□□□□ 0.3
SNRPA1-202ENST00000394082 C9J4A7 227 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 H3BMH7 237 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 ZNF749O43361 778 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 KLHL41O60662 606 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 AGFG2O95081 481 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 IGHEP01854 428 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 PDHA2P29803 388 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 NSG1P42857 185 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 PLOD1Q02809 727 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 CACNG1Q06432 222 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 INPP5JQ15735 1006 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 SPESP1Q6UW49 350 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 CDHR3Q6ZTQ4 885 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 SERPINA9Q86WD7 417 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 RAB43Q86YS6 212 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 GPR135Q8IZ08 494 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 STYXQ8WUJ0 223 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 PNPLA2Q96AD5 504 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 CDKN2AIPNLQ96HQ2 116 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 DNAJC1Q96KC8 554 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 NUDT9Q9BW91 350 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 SLC7A5P2Q9GIP4 190 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 FAM96AQ9H5X1 160 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 GPR83Q9NYM4 423 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 SHANK1Q9Y566 2161 aa16.93■□□□□ 0.3
SNRPA1-202ENST00000394082 MACROD2A1Z1Q3 448 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 KLF7O75840 302 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 SHMT2P34897 504 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 LMAN1P49257 510 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 TMPRSS15P98073 1019 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 ITIH4Q14624 930 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 SSPNQ14714 243 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 C4orf17Q53FE4 359 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 RHBDD2Q6NTF9 364 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 PACS1Q6VY07 963 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 TMTC1Q8IUR5 882 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 CLDN19Q8N6F1 224 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 Q8NA96 180 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 TTC13Q8NBP0 860 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 PHC3Q8NDX5 983 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 PROKR1Q8TCW9 393 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 SSC4DQ8WTU2 575 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 NACC2Q96BF6 587 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 LRRC40Q9H9A6 602 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 POLG2Q9UHN1 485 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 TFR2Q9UP52 801 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 UNC79Q9P2D8 2635 aa16.92■□□□□ 0.3
SNRPA1-202ENST00000394082 MROH6A6NGR9 719 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 ACADLP28330 430 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 CDKN1CP49918 316 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 P3H1Q32P28 736 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 ZRANB3Q5FWF4 1079 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 VWA5B1Q5TIE3 1220 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 SLC6A19Q695T7 634 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 TBC1D21Q8IYX1 336 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 RBMXL3Q8N7X1 1067 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 C19orf47Q8N9M1 422 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 SGSM3Q96HU1 749 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 FER1L6-AS2Q96M78 137 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 SLC29A3Q9BZD2 475 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 SLAMF7Q9NQ25 335 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 PLEKHB1Q9UF11 243 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 ICKQ9UPZ9 632 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 EPN1Q9Y6I3 576 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 ICE1Q9Y2F5 2266 aa16.91■□□□□ 0.3
SNRPA1-202ENST00000394082 PIKFYVEQ9Y2I7 2098 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 ESPL1Q14674 2120 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 ZNF185O15231 689 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 PSMD3O43242 534 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 KDM1AO60341 852 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 DDAH2O95865 285 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 FTH1P02794 183 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 GABRA4P48169 554 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 SOX8P57073 446 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 PRKG2Q13237 762 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 DBN1Q16643 649 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 PTCHD3Q3KNS1 767 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms