RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CCDC126Q96EE4 140 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CCDC134Q9H6E4 229 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 MANSC1Q9H8J5 431 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CFAP20Q9Y6A4 193 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PRR33A8MZF0 331 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 IFRD1O00458 451 aaPredicted RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 S100BP04271 92 aaPredicted RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 CTSEP14091 401 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 NME1P15531 152 aaKnown RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 CBX1P83916 185 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 CCSMST1Q4G0I0 132 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 PRAMEF14Q5SWL7 426 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 UNC5DQ6UXZ4 953 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 SLC22A9Q8IVM8 553 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 TRIM42Q8IWZ5 723 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 PHC3Q8NDX5 983 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 MCOLN3Q8TDD5 553 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 TFGQ92734 400 aaPredicted RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 MOCOSQ96EN8 888 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 TMEM237Q96Q45 408 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 INSM2Q96T92 566 aaPredicted RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 GATA5Q9BWX5 397 aaPredicted RBP23.68■■□□□ 1.38
LRFN4-202ENST00000393952 TRIM54Q9BYV2 358 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 SUSD2Q9UGT4 822 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 ASF1AQ9Y294 204 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 ZNF318Q5VUA4 2279 aa23.68■■□□□ 1.38
LRFN4-202ENST00000393952 PRR5-ARHGAP8B1AHC4 643 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 C1orf105O95561 183 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 EML2O95834 649 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 MAP4P27816 1152 aaKnown RBP23.67■■□□□ 1.38
LRFN4-202ENST00000393952 LSP1P33241 339 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 DNAJB13P59910 316 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 C1orf61Q13536 156 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 CLCA4Q14CN2 919 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 UAP1L1Q3KQV9 507 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 PRRT3Q5FWE3 981 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 FBXO48Q5FWF7 155 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 DUS1LQ6P1R4 473 aaKnown RBP23.67■■□□□ 1.38
LRFN4-202ENST00000393952 PRR23BQ6ZRT6 265 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 PDPRQ8NCN5 879 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 SREK1Q8WXA9 508 aaKnown RBP23.67■■□□□ 1.38
LRFN4-202ENST00000393952 C12orf66Q96MD2 445 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 EGFL8Q99944 293 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 LRRC61Q9BV99 259 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 GSDMCQ9BYG8 508 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 ARL15Q9NXU5 204 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 SCHIP1Q9P0W5 487 aaPredicted RBP23.67■■□□□ 1.38
LRFN4-202ENST00000393952 CIDEBQ9UHD4 219 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 TMCO1Q9UM00 188 aa23.67■■□□□ 1.38
LRFN4-202ENST00000393952 ARHGEF17Q96PE2 2063 aaPredicted RBP23.67■■□□□ 1.38
LRFN4-202ENST00000393952 PI4KAP42356 2102 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 LRRC14BA6NHZ5 514 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 SIX3O95343 332 aaPredicted RBP23.66■■□□□ 1.38
LRFN4-202ENST00000393952 HIST1H2AGP0C0S8 130 aaPredicted RBP23.66■■□□□ 1.38
LRFN4-202ENST00000393952 HIST1H2ADP20671 130 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 NAGLUP54802 743 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 C18orf21Q32NC0 220 aaPredicted RBP23.66■■□□□ 1.38
LRFN4-202ENST00000393952 SYT12Q8IV01 421 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 CCNYL1Q8N7R7 359 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 OR5AR1Q8NGP9 310 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 OR6Y1Q8NGX8 325 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 HIST1H2AHQ96KK5 128 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 HIST1H2AJQ99878 128 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 H2AFJQ9BTM1 129 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 CACNA1EQ15878 2313 aa23.66■■□□□ 1.38
LRFN4-202ENST00000393952 PABPN1LA6NDY0 278 aaKnown RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 TCP11X1B4DZS4 312 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 SERPINE1P05121 402 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 AGTR2P50052 363 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ALDH18A1P54886 795 aaKnown RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 CDKL1Q00532 357 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 BNC1Q01954 994 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 BST1Q10588 318 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ASPHQ12797 758 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 SETDB1Q15047 1291 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 LPAL2Q16609 132 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 KIF19Q2TAC6 998 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 WASH2PQ6VEQ5 465 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 RGS9BPQ6ZS82 235 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 RAB44Q7Z6P3 723 aaPredicted RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 FBXO15Q8NCQ5 510 aaPredicted RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 RAB3IL1Q8TBN0 382 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 WASH6PQ9NQA3 447 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 IMP3Q9NV31 184 aaKnown RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 SNX11Q9Y5W9 270 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 TMEM131Q92545 1883 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 A6NCN8 305 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 OR52A4PA6NMU1 304 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ANXA5P08758 320 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 IMPDH1P20839 514 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 CTSKP43235 329 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 AP1S2P56377 157 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 HERVK_113P63132 956 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 STX3Q13277 289 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 RPE65Q16518 533 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ZNF678Q5SXM1 525 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 PEAR1Q5VY43 1037 aaPredicted RBP23.65■■□□□ 1.38
LRFN4-202ENST00000393952 SULT1C3Q6IMI6 304 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 ABRAXAS1Q6UWZ7 409 aa23.65■■□□□ 1.38
LRFN4-202ENST00000393952 TAF8Q7Z7C8 310 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms