RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PVRP15151 417 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 FOLR1P15328 257 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF28P17035 718 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 PGAM1P18669 254 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 OGNP20774 298 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 RPS3P23396 243 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 AOAHP28039 575 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 PPARGP37231 505 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 TSPAN7P41732 249 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ELK3P41970 407 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 BDKRB1P46663 353 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 CD151P48509 253 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 KPNA2P52292 529 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 CXADRP78310 365 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 FOXK1P85037 733 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 RPA4Q13156 261 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 THOC5Q13769 683 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 FASTKD3Q14CZ7 662 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 LONRF1Q17RB8 773 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCSMST1Q4G0I0 132 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 HIBCHQ6NVY1 386 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARMC6Q6NXE6 501 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF549Q6P9A3 640 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF449Q6P9G9 518 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 CNSTQ6PJW8 725 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SYDE1Q6ZW31 735 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRSS42Q7Z5A4 293 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SDCCAG8Q86SQ7 713 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRIM73Q86UV7 250 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 TAX1BP1Q86VP1 789 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 HOOK3Q86VS8 718 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 KCNMB4Q86W47 210 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 AMIGO1Q86WK6 493 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 OOSP2Q86WS3 158 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM20CQ8IXL6 584 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC22A15Q8IZD6 547 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 C2orf73Q8N5S3 287 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACVR1CQ8NER5 493 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SKA2Q8WVK7 121 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF592Q92610 1267 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZDHHC12Q96GR4 267 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SNF8Q96H20 258 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 IL17FQ96PD4 163 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR6C1Q96RD1 312 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 TAAR9Q96RI9 348 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 NDNQ99608 321 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC30A3Q99726 388 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 CARD6Q9BX69 1037 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SRMSQ9H3Y6 488 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF768Q9H5H4 540 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPHK1Q9NYA1 384 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 HEBP2Q9Y5Z4 205 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 NFS1Q9Y697 457 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ANKRD11Q6UB99 2663 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 KIF26BQ2KJY2 2108 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 MAGEB16A2A368 324 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC9B1P1A6NJY1 282 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 POLR1CO15160 346 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 EFSO43281 561 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 GPC4O75487 556 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 HAUS5O94927 633 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TIAF1O95411 115 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 APOA4P06727 396 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 GSTM1P09488 218 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 LIPCP11150 499 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PKMP14618 531 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 WT1P19544 449 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 CHRM3P20309 590 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 NDUFS1P28331 727 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PEBP1P30086 187 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 MLLT3P42568 568 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 CARSP49589 748 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PGGT1BP53609 377 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 MC2RQ01718 297 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 GSTM4Q03013 218 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 CUL1Q13616 776 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 GRB7Q14451 532 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 MORF4L2Q15014 288 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMED2Q15363 201 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRADDQ15628 312 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 GPR19Q15760 415 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 HIF1AQ16665 826 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 DNAJC21Q5F1R6 531 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACSBG2Q5FVE4 666 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 DCAF12Q5T6F0 453 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 RNF187Q5TA31 235 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARHGAP40Q5TG30 622 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM164Q5U3C3 297 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRMT10BQ6PF06 316 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL35Q6PF15 583 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 UNC5AQ6ZN44 842 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 OTOAQ7RTW8 1153 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PCGF5Q86SE9 256 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 LRRC6Q86X45 466 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ADGRF3Q8IZF5 1079 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 SIDT2Q8NBJ9 832 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR5K2Q8NHB8 316 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms