RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ASZ1Q8WWH4 475 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 ELMO1Q92556 727 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 TMEM125Q96AQ2 219 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 BTBD9Q96Q07 612 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 VPS35Q96QK1 796 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 GRXCR2A6NFK2 248 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 PRRT4C9JH25 899 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 MANBAO00462 879 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 SMNDC1O75940 238 aaKnown RBP eCLIP18.68■□□□□ 0.58
ERCC2-203ENST00000391944 SLC2A4P14672 509 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 SLC7A1P30825 629 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 BNIP2Q12982 314 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 TIGD2Q4W5G0 525 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 FAM109BQ6ICB4 259 aaPredicted RBP18.68■□□□□ 0.58
ERCC2-203ENST00000391944 ICA1LQ8NDH6 482 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 USP7Q93009 1102 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 NXPE3Q969Y0 559 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 SLCO4A1Q96BD0 722 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 FAM83CQ9BQN1 747 aa18.68■□□□□ 0.58
ERCC2-203ENST00000391944 FARSBQ9NSD9 589 aaKnown RBP18.68■□□□□ 0.58
ERCC2-203ENST00000391944 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
ERCC2-203ENST00000391944 TRANK1O15050 2925 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 MAGEA13PA6NCF6 341 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 A6NHS1 94 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 QSOX1O00391 747 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 SLCO2B1O94956 709 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 NFATC1O95644 943 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 ELFN1P0C7U0 828 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 CYP2A7P20853 494 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 SLC6A12P48065 614 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 ERVK-21P61565 698 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 MAD2L1Q13257 205 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 LDLRAP1Q5SW96 308 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 RASGRP3Q8IV61 690 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 NPAS3Q8IXF0 933 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 NRSN1Q8IZ57 195 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 DPP10Q8N608 796 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 ZFYVE19Q96K21 471 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 ASB16Q96NS5 453 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 POLR3HQ9Y535 204 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 PSMD11O00231 422 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 IFRD1O00458 451 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 KPNA3O00505 521 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 PRNPP04156 253 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 JAK1P23458 1154 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 SLC6A11P48066 632 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 AP1S2P56377 157 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 GRIN2CQ14957 1233 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 GAB4Q2WGN9 574 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 IRAK1BP1Q5VVH5 260 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 TMEM154Q6P9G4 183 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 BEND7Q8N7W2 519 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 OR2T34Q8NGX1 318 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 OR2T3Q8NH03 318 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 DNAJB14Q8TBM8 379 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 MCOLN3Q8TDD5 553 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 SMARCD2Q92925 531 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 GLYATL1Q969I3 302 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 P2RY13Q9BPV8 354 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 ACTR8Q9H981 624 aa18.67■□□□□ 0.58
ERCC2-203ENST00000391944 EIF3LQ9Y262 564 aaKnown RBP18.67■□□□□ 0.58
ERCC2-203ENST00000391944 PABPN1LA6NDY0 278 aaKnown RBP18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ARNTLO00327 626 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 GNPDA1P46926 289 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ACOX1Q15067 660 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ZNF648Q5T619 568 aaPredicted RBP18.66■□□□□ 0.58
ERCC2-203ENST00000391944 AP2M1Q96CW1 435 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 SLAMF8Q9P0V8 285 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 DEC1Q9P2X7 70 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ZNHIT2Q9UHR6 403 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 OTOL1A6NHN0 477 aaPredicted RBP18.66■□□□□ 0.58
ERCC2-203ENST00000391944 OR2AG2A6NM03 316 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 KRT6AP02538 564 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 KRT6BP04259 564 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ATP6V1B2P21281 511 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 KRT6CP48668 564 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 RPL38P63173 70 aaKnown RBP18.66■□□□□ 0.58
ERCC2-203ENST00000391944 HMGCS1Q01581 520 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 MED21Q13503 144 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 PTCHD3Q3KNS1 767 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 KIAA2013Q8IYS2 634 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 RGL4Q8IZJ4 473 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 ACTR3BQ9P1U1 418 aa18.66■□□□□ 0.58
ERCC2-203ENST00000391944 AQP12BA6NM10 295 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 WNT9AO14904 365 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 GRIA3P42263 894 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 HNRNPA1L2Q32P51 320 aaKnown RBP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 GGTA1PQ4G0N0 100 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 SGO1Q5FBB7 561 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 RABL3Q5HYI8 236 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 NANOGP8Q6NSW7 305 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 AQP12AQ8IXF9 295 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 RAVER1Q8IY67 606 aaKnown RBP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 RASGEF1AQ8N9B8 481 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 TMIEQ8NEW7 156 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 UHRF1Q96T88 793 aaPredicted RBP18.65■□□□□ 0.58
ERCC2-203ENST00000391944 EFHD1Q9BUP0 239 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 TRIM15Q9C019 465 aa18.65■□□□□ 0.58
ERCC2-203ENST00000391944 VCXQ9H320 206 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms