RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 FOXM1Q08050 763 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 BRD3Q15059 726 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 LONRF1Q17RB8 773 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 TMTC4Q5T4D3 741 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 CCDC81Q6ZN84 652 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 OTOAQ7RTW8 1153 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 CILP2Q8IUL8 1156 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 DCUN1D3Q8IWE4 304 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 SIDT2Q8NBJ9 832 aaKnown RBP12.31□□□□□ -0.44
GGPS1-203ENST00000391855 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
GGPS1-203ENST00000391855 OR4E2Q8NGC2 313 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 LKAAEAR1Q8TD35 194 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 FCRL4Q96PJ5 515 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 MAP3K3Q99759 626 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 FAM167BQ9BTA0 163 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 PDE7BQ9NP56 450 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 C1GALT1Q9NS00 363 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 OR6C2Q9NZP2 312 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 BTRCQ9Y297 605 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 TMEM184BQ9Y519 407 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-203ENST00000391855 COMMD10Q9Y6G5 202 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 DMXL2Q8TDJ6 3036 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 GSAPA4D1B5 854 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 MAP3K7O43318 606 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 KIF1CO43896 1103 aaKnown RBP12.3□□□□□ -0.44
GGPS1-203ENST00000391855 RAD1O60671 282 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 ITGB6P18564 788 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 POLR2CP19387 275 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-203ENST00000391855 ATP5DP30049 168 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 HSD11B2P80365 405 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-203ENST00000391855 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
GGPS1-203ENST00000391855 SPANXN3Q5MJ09 141 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 CTSL3PQ5NE16 218 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 ZNF470Q6ECI4 717 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 NLGN4XQ8N0W4 816 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 D2HGDHQ8N465 521 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 NLGN4YQ8NFZ3 816 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-203ENST00000391855 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 OR8K5Q8NH50 307 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 PMEPA1Q969W9 287 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 SNF8Q96H20 258 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 OR6C1Q96RD1 312 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 EFHD1Q9BUP0 239 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 RAB11FIP5Q9BXF6 653 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 CCDC68Q9H2F9 335 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 SYTL2Q9HCH5 934 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 RARRES3Q9UL19 164 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
GGPS1-203ENST00000391855 IGHV5-51A0A0C4DH38 117 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 IQCF5A8MTL0 148 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 GOLGA8KD6RF30 607 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 K7ENP7 123 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 BTN3A1O00481 513 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 FANCGO15287 622 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 STK17BO94768 372 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 SEC31AO94979 1220 aaKnown RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 MSL3P1P0C860 447 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PKMP14618 531 aaKnown RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 CDH3P22223 829 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 IVDP26440 423 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 MAP4P27816 1152 aaKnown RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PPP1CAP62136 330 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 RHDQ02161 417 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PRKG2Q13237 762 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 TUBB3Q13509 450 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 TGIF1Q15583 401 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 TTLL9Q3SXZ7 439 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 INO80CQ6PI98 192 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 CENPUQ71F23 418 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 KRT222Q8N1A0 295 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 RAB42Q8N4Z0 105 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 ESX1Q8N693 406 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 ZSCAN1Q8NBB4 408 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 MAGEC3Q8TD91 643 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 NKD1Q969G9 470 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 FOPNLQ96NB1 174 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 BIRC8Q96P09 236 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 UBL7Q96S82 380 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 EBNA1BP2Q99848 306 aaKnown RBP12.29□□□□□ -0.44
GGPS1-203ENST00000391855 CTRCQ99895 268 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 FANCEQ9HB96 536 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 APMAPQ9HDC9 416 aa12.29□□□□□ -0.44
GGPS1-203ENST00000391855 C20orf96Q9NUD7 363 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms