RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TOR3AQ9H497 397 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 ARVCFO00192 962 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SNAPC5O75971 98 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SLC1A2P43004 574 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 RPS14P62263 151 aaKnown RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 CD83Q01151 205 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 GTF2H2Q13888 395 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 HNRNPDQ14103 355 aaKnown RBP19.37■□□□□ 0.69
SHANK1-203ENST00000391813 GTF2H2CQ6P1K8 395 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SPATA22Q8NHS9 363 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 MIOSQ9NXC5 875 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 TESMINQ9Y4I5 508 aa19.37■□□□□ 0.69
SHANK1-203ENST00000391813 SMIM28A0A1B0GU29 152 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 HMGB3O15347 200 aaKnown RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 OR2T5Q6IEZ7 315 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CHPFQ8IZ52 775 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 OR2T29Q8NH02 315 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 OR52J3Q8NH60 311 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 FBXL18Q96ME1 805 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 KCTD7Q96MP8 289 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 COL21A1Q96P44 957 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 OSGEPL1Q9H4B0 414 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 ASB3Q9Y575 518 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 FUOMA2VDF0 154 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 NEMP2A6NFY4 417 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 AURKAO14965 403 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SCNN1AP37088 669 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 MNDAP41218 407 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 RELAQ04206 551 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 OLFML2AQ68BL7 652 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 PGBD2Q6P3X8 592 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 MON1AQ86VX9 555 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 LIX1Q8N485 282 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CORO1BQ9BR76 489 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SLC39A3Q9BRY0 314 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 ABCG8Q9H221 673 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 ZDHHC7Q9NXF8 308 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 EIF3KQ9UBQ5 218 aaKnown RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 HMGXB4Q9UGU5 601 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CNTNAP1P78357 1384 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CENPBD1B2RD01 187 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CAPN15O75808 1086 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 MAZP56270 477 aaKnown RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 TAS2R41P59536 307 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 MYBPC1Q00872 1141 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 C9orf57Q5W0N0 161 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 UBE2R2Q712K3 238 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 UBE2J2Q8N2K1 259 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 IRGQQ8WZA9 623 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SUSD6Q92537 303 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SIGLEC10Q96LC7 697 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 MFSD1Q9H3U5 465 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CCM2LQ9NUG4 571 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 ABCG2Q9UNQ0 655 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SNRPD1P62314 119 aaKnown RBP19.36■□□□□ 0.69
SHANK1-203ENST00000391813 PITPNAQ00169 270 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CBLBQ13191 982 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SPAG16Q8N0X2 631 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 SEMA3GQ9NS98 782 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 FZD10Q9ULW2 581 aa19.36■□□□□ 0.69
SHANK1-203ENST00000391813 CDH5P33151 784 aaPredicted RBP19.35■□□□□ 0.69
SHANK1-203ENST00000391813 DAW1Q8N136 415 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 SLC38A4Q969I6 547 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 C1QTNF7Q9BXJ2 289 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 DSN1Q9H410 356 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 COMMD3Q9UBI1 195 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 RNF6Q9Y252 685 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 CLDN5O00501 218 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 STX16O14662 325 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 RNASEH2AO75792 299 aaKnown RBP19.35■□□□□ 0.69
SHANK1-203ENST00000391813 RHOQP17081 205 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 ZC3HC1Q86WB0 502 aaKnown RBP19.35■□□□□ 0.69
SHANK1-203ENST00000391813 BIRC7Q96CA5 298 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 FPR1P21462 350 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 OR1D2P34982 312 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 MANFP55145 182 aaKnown RBP19.35■□□□□ 0.69
SHANK1-203ENST00000391813 FAM91A1Q658Y4 838 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 TXNRD3NBQ6F5E7 133 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 HSPB11Q9Y547 144 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 CCR10P46092 362 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 FCRL5Q96RD9 977 aa19.35■□□□□ 0.69
SHANK1-203ENST00000391813 ESR1P03372 595 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 MAPK9P45984 424 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 SETMARQ53H47 684 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-203ENST00000391813 ANKRD13BQ86YJ7 626 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 TMIEQ8NEW7 156 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 TEPSINQ96N21 525 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 ZNF510Q9Y2H8 683 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 SPEF2Q9C093 1822 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 PEX10O60683 326 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 GRIA1P42261 906 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 CXCR3P49682 368 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 TLE2Q04725 743 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 BIKQ13323 160 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 TRAPPC5Q8IUR0 188 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 PYROXD2Q8N2H3 581 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 AMBNQ9NP70 447 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHANK1-203ENST00000391813 EIF2B4Q9UI10 523 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms