RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SHMT1P34896 483 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PBX1P40424 430 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TNFSF9P41273 254 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SKIV2L2P42285 1042 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TNFRSF4P43489 277 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GSTM5P46439 218 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RPS10P46783 165 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FASLGP48023 281 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MTNR1BP49286 362 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FNTAP49354 379 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GSK3BP49841 420 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CDKN1CP49918 316 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CAV2P51636 162 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RIDAP52758 137 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NDST1P52848 882 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC25A1P53007 311 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CRISP3P54108 245 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RAD23BP54727 409 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 EMP2P54851 167 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NDUFV3P56181 108 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SESN3P58005 492 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TAS2R50P59544 299 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RPS3AP61247 264 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RACK1P63244 317 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ACTA1P68133 377 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CTAG1AP78358 180 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KRT85P78386 507 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IRX4P78413 519 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SRPXP78539 464 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SORDQ00796 357 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TLE3Q04726 772 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KCNA1Q09470 495 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NOGQ13253 232 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IL15RAQ13261 267 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MFAP5Q13361 173 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ORC2Q13416 577 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TNK1Q13470 666 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RAB32Q13637 225 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IL10RAQ13651 578 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CAPSQ13938 189 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CIRBPQ14011 172 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GIT2Q14161 759 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FASTKQ14296 549 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 EFTUD2Q15029 972 aaKnown RBP eCLIP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF146Q15072 292 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 DUOXA1Q1HG43 343 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM83EQ2M2I3 478 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 DEFB115Q30KQ5 88 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZACNQ401N2 412 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MTERF2Q49AM1 385 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP13A4Q4VNC1 1196 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SOWAHCQ53LP3 525 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC45A4Q5BKX6 768 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SGO1Q5FBB7 561 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGGQ5H8A4 983 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NHLRC3Q5JS37 347 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 C10orf91Q5T1B1 145 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF684Q5T5D7 378 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 C9orf66Q5T8R8 295 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 THEMIS2Q5TEJ8 643 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SOGA3Q5TF21 947 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 AGAP6Q5VW22 663 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM268Q5VZI3 342 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM198Q66K66 360 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KCTD11Q693B1 232 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR52W1Q6IF63 320 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 EMBQ6PCB8 327 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 C16orf87Q6PH81 154 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC30A9Q6PML9 568 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RAD9BQ6WBX8 426 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 B3GNT6Q6ZMB0 384 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 Q6ZRN7 208 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 EPM2AIP1Q7L775 607 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CHST15Q7LFX5 561 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 BHLHA15Q7RTS1 189 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PRSS45Q7RTY3 260 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC46A3Q7Z3Q1 461 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KRT28Q7Z3Y7 464 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GRINAQ7Z429 371 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 AACSQ86V21 672 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR180Q86V85 440 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGZQ86VD9 579 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MON1AQ86VX9 555 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PPP1R3BQ86XI6 285 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 APOBEC3FQ8IUX4 373 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FOXRED2Q8IWF2 684 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RPAP2Q8IXW5 612 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PIANPQ8IYJ0 282 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CEND1Q8N111 149 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NXPE1Q8N323 547 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MPP5Q8N3R9 675 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GALNT15Q8N3T1 639 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC15A4Q8N697 577 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CELF2-AS1Q8N7Q2 184 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ANKRD42Q8N9B4 389 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NAT8LQ8N9F0 302 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HJURPQ8NCD3 748 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MDS2Q8NDY4 140 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GPRC5AQ8NFJ5 357 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR2T12Q8NG77 320 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms