RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PRKRAO75569 313 aaKnown RBP2.83□□□□□ -1.96
TRAV40-201ENST00000390467 CREG1O75629 220 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 CLTBP09497 229 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 ZSCAN5DPP0CG00 497 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 CHMP24386 653 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 SHC1P29353 583 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 MAN1A1P33908 653 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 CHRNA7P36544 502 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 SLC8A3P57103 927 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 PRAMEP78395 509 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 PRKCZQ05513 592 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 GLIPR1L2Q4G1C9 344 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 ALFQ53S48 1182 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 JAKMIP3Q5VZ66 844 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 HAUS3Q68CZ6 603 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 PAQR6Q6TCH4 344 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 AACSQ86V21 672 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 TRIML1Q8N9V2 468 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 OR5AP2Q8NGF4 316 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 OR13J1Q8NGT2 312 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 USP6NLQ92738 828 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 MOAP1Q96BY2 351 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 OMA1Q96E52 524 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 PGAM5Q96HS1 289 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 FNBP1Q96RU3 617 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 EPHA6Q9UF33 1036 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 ANGPTL3Q9Y5C1 460 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.83□□□□□ -1.96
TRAV40-201ENST00000390467 CSAG2Q9Y5P2 127 aa2.83□□□□□ -1.96
TRAV40-201ENST00000390467 TDRD9Q8NDG6 1382 aaKnown RBP2.83□□□□□ -1.96
TRAV40-201ENST00000390467 LNP1A1A4G5 178 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 CDRT15L2A8MXV6 281 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.82□□□□□ -1.96
TRAV40-201ENST00000390467 KLF11O14901 512 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 SSX4O60224 188 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 SCGB1D1O95968 90 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 TLX1P31314 330 aaPredicted RBP2.82□□□□□ -1.96
TRAV40-201ENST00000390467 OPRL1P41146 370 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 KCNC3Q14003 757 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 UGP2Q16851 508 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 SGSM1Q2NKQ1 1148 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 FASTKD1Q53R41 847 aaKnown RBP2.82□□□□□ -1.96
TRAV40-201ENST00000390467 C2CD6Q53TS8 623 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 MDH1BQ5I0G3 518 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 BSPRYQ5W0U4 402 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 ZNF774Q6NX45 483 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 TRIM65Q6PJ69 517 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 LMNTD2Q8IXW0 634 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 OR2AJ1Q8NGZ0 328 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 AZIN2Q96A70 460 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 CENPTQ96BT3 561 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 NSMCE3Q96MG7 304 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 OR6C1Q96RD1 312 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 PSMD1Q99460 953 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 PIGQQ9BRB3 760 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 FUCA2Q9BTY2 467 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 S1PR5Q9H228 398 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 DPAGT1Q9H3H5 408 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 OLA1Q9NTK5 396 aaKnown RBP2.82□□□□□ -1.96
TRAV40-201ENST00000390467 ZNF701Q9NV72 531 aaPredicted RBP2.82□□□□□ -1.96
TRAV40-201ENST00000390467 ZDHHC2Q9UIJ5 367 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 WDR37Q9Y2I8 494 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 ZHX2Q9Y6X8 837 aa2.82□□□□□ -1.96
TRAV40-201ENST00000390467 ZNF318Q5VUA4 2279 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 HYKKA2RU49 373 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 HEPACAM2A8MVW5 462 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 MITFO75030 526 aaPredicted RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 ARL3P36405 182 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 HADHAP40939 763 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 HNF4AP41235 474 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 SETQ01105 290 aaPredicted RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 NECTIN1Q15223 517 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 TAF13Q15543 124 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 SLC25A53Q5H9E4 307 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 INTS8Q75QN2 995 aaKnown RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 PTAR1Q7Z6K3 402 aaPredicted RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 LRRTM1Q86UE6 522 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 MCEMP1Q8IX19 187 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 CEP57L1Q8IYX8 460 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 LSMEM2Q8N112 164 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 SCFD2Q8WU76 684 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 FTOQ9C0B1 505 aaKnown RBP eCLIP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 UNC45AQ9H3U1 944 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 TUBE1Q9UJT0 475 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 ZHX1Q9UKY1 873 aaPredicted RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 EXO1Q9UQ84 846 aaKnown RBP2.81□□□□□ -1.96
TRAV40-201ENST00000390467 RUSC2Q8N2Y8 1516 aa2.81□□□□□ -1.96
TRAV40-201ENST00000390467 ADAMTS9Q9P2N4 1935 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 EPM2AB3EWF7 344 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 OR10H2O60403 315 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 USO1O60763 962 aaKnown RBP2.8□□□□□ -1.96
TRAV40-201ENST00000390467 WDPCPO95876 746 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 TRIM49P0CI25 452 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 TRIM49CP0CI26 452 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 CAPN2P17655 700 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 UGT1A4P22310 534 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 CA6P23280 308 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 MMP12P39900 470 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 PDX1P52945 283 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 CXCL9Q07325 125 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms