RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ANKDD1BA6NHY2 528 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 AREL1O15033 823 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 WBP4O75554 376 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 SMPD1P17405 629 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARRB2P32121 409 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ACVRL1P37023 503 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPIAP49247 311 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 YBEYP58557 167 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 SCN1BQ07699 218 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 CD47Q08722 323 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 CPTPQ5TA50 214 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ISCA2Q86U28 154 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ACBD6Q9BR61 282 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 AGPAT4Q9NRZ5 378 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PRAMEF1O95521 474 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 MT-ND2P03891 347 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 HTR1EP28566 365 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC15A1P46059 708 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 IL10RBQ08334 325 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 MSANTD2Q6P1R3 559 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 C14orf80Q86SX3 495 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 LSMEM2Q8N112 164 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 STARD8Q92502 1023 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 NFKBIZQ9BYH8 718 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 IGSF5Q9NSI5 407 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 SPATA7Q9P0W8 599 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF222Q9UK12 451 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PABPC1P11940 636 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 AGXTP21549 392 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 HTR7P34969 479 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SYVN1Q86TM6 617 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR4A15Q8NGL6 344 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 POP5Q969H6 163 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 PYCR2Q96C36 320 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 Q96MT0 163 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC30A3Q99726 388 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 GIT1Q9Y2X7 761 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ILVBLA1L0T0 632 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF701M0R085 212 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 BTN3A3O00478 584 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 S1PR4O95977 384 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 MATN1P21941 496 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 PRKAG1P54619 331 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 MLLT6P55198 1093 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 PURAQ00577 322 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC36A3Q495N2 470 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 DEF8Q6ZN54 512 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 RETREG3Q86VR2 466 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF641Q96N77 438 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 COPS8Q99627 209 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 MYOCQ99972 504 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 GSTO2Q9H4Y5 243 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ING3Q9NXR8 418 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 A8MU76 341 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC1A7O00341 560 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 OPN1SWP03999 348 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 IFI30P13284 250 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 TNNI3P19429 210 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ITIH1P19827 911 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 HNF4AP41235 474 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 HUNKP57058 714 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SEMG2Q02383 582 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR4D1Q15615 310 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 ERICH5Q6P6B1 374 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 TPGS1Q6ZTW0 290 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRMT11Q7Z4G4 463 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 FRS2Q8WU20 508 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 AIG1Q9NVV5 245 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 RNF6Q9Y252 685 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 LRP5O75197 1615 aa12.9□□□□□ -0.34
TRAPPC9-201ENST00000389328 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 LCHNA4D1U4 455 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAGEB17A8MXT2 336 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 CASKO14936 926 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 INSIG1O15503 277 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 NDUFB5O43674 189 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALDH1A1P00352 501 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 ESR1P03372 595 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 TACR2P21452 398 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 GSTM2P28161 218 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms