RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 ZNF789Q5FWF6 425 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 TCTN3Q6NUS6 607 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 BPHLQ86WA6 291 aaPredicted RBP13.72□□□□□ -0.21
SHOX-202ENST00000381575 ADGRF3Q8IZF5 1079 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
SHOX-202ENST00000381575 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 CLIP3Q96DZ5 547 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 C1GALT1Q9NS00 363 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 ACTR10Q9NZ32 417 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 FARSAQ9Y285 508 aaKnown RBP13.72□□□□□ -0.21
SHOX-202ENST00000381575 HIVEP3Q5T1R4 2406 aa13.72□□□□□ -0.21
SHOX-202ENST00000381575 MEN1O00255 615 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 OR1I1O60431 355 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 IFNB1P01574 187 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 CYP2A7P20853 494 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 FOXN2P32314 431 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 SEMA5AQ13591 1074 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
SHOX-202ENST00000381575 P3H1Q32P28 736 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 FAM198BQ6UWH4 519 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 CDHR3Q6ZTQ4 885 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 C1orf54Q8WWF1 131 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 CPT1BQ92523 772 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 ELMO1Q92556 727 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 HES6Q96HZ4 224 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 TRAPPC9Q96Q05 1148 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 ALS2CR12Q96Q35 445 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 GPR87Q9BY21 358 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 TFB2MQ9H5Q4 396 aaKnown RBP13.71□□□□□ -0.21
SHOX-202ENST00000381575 MVB12BQ9H7P6 319 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 ACTR5Q9H9F9 607 aaPredicted RBP13.71□□□□□ -0.21
SHOX-202ENST00000381575 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 TDRKHQ9Y2W6 561 aaKnown RBP13.71□□□□□ -0.21
SHOX-202ENST00000381575 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.21
SHOX-202ENST00000381575 MROH6A6NGR9 719 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 HCRTR1O43613 425 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 CAPN1P07384 714 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 CTSBP07858 339 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 RORAP35398 523 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 CD151P48509 253 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 CCL11P51671 97 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 RPA4Q13156 261 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 SNX1Q13596 522 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 ZNF449Q6P9G9 518 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 SPESP1Q6UW49 350 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 PPP1R21Q6ZMI0 780 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 ZNF517Q6ZMY9 492 aaPredicted RBP13.71□□□□□ -0.22
SHOX-202ENST00000381575 SYVN1Q86TM6 617 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 APLFQ8IW19 511 aaPredicted RBP13.71□□□□□ -0.22
SHOX-202ENST00000381575 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 CARFQ8N187 725 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 OR13J1Q8NGT2 312 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 OR8K5Q8NH50 307 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 HDAC10Q969S8 669 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 ZNF778Q96MU6 729 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 C19orf43Q9BQ61 176 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 PITPNM3Q9BZ71 974 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 ETNK1Q9HBU6 452 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 FAM60AQ9NP50 221 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 LATS2Q9NRM7 1088 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 PCMTD2Q9NV79 361 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 SPHK1Q9NYA1 384 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 SNX7Q9UNH6 387 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 ASF1AQ9Y294 204 aa13.71□□□□□ -0.22
SHOX-202ENST00000381575 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 MATN2O00339 956 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 LIASO43766 372 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
SHOX-202ENST00000381575 AP2A2O94973 939 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
SHOX-202ENST00000381575 KLK3P07288 261 aaPredicted RBP13.7□□□□□ -0.22
SHOX-202ENST00000381575 TPBGLP0DKB5 382 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 UGT2B7P16662 529 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 NSG1P42857 185 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 GSDMDP57764 484 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 FOXL2P58012 376 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 OASLQ15646 514 aaKnown RBP13.7□□□□□ -0.22
SHOX-202ENST00000381575 ZIC1Q15915 447 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 SYTL3Q4VX76 610 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 SEL1L2Q5TEA6 688 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 UNC5AQ6ZN44 842 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 FAM20CQ8IXL6 584 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 GLIS1Q8NBF1 620 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 LKAAEAR1Q8TD35 194 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 SLC7A5P2Q9GIP4 190 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 ING2Q9H160 280 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 TCFL5Q9UL49 500 aa13.7□□□□□ -0.22
SHOX-202ENST00000381575 NBPF19A0A087WUL8 3843 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms