RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CHCHD6Q9BRQ6 235 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 UGT2B28Q9BY64 529 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 NMUR1Q9HB89 426 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 EXOSC4Q9NPD3 245 aaKnown RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 NMRK2Q9NPI5 230 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 MAGEL2Q9UJ55 1249 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 SNX6Q9UNH7 406 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 FRMPD3Q5JV73 1810 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 hCG_2039718K7EN88 272 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 CDC7O00311 574 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 C7P10643 843 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 G6PDP11413 515 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 IGFBP5P24593 272 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 FLT3LGP49771 235 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 OR2B6P58173 313 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 TMEM179BQ7Z7N9 219 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 ANKRD46Q86W74 232 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 HID1Q8IV36 788 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 RHOXF1Q8NHV9 184 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 METTL6Q8TCB7 284 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 RBM4BQ9BQ04 359 aaKnown RBP13.6□□□□□ -0.23
SDC1-202ENST00000381150 RBM4Q9BWF3 364 aaKnown RBP13.6□□□□□ -0.23
SDC1-202ENST00000381150 ABCC13Q9NSE7 274 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 OSER1Q9NX31 292 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 TPRKBQ9Y3C4 175 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 ZSCAN5BA6NJL1 495 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 UPK1BO75841 260 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 ABCB1P08183 1280 aaPredicted RBP13.6□□□□□ -0.23
SDC1-202ENST00000381150 CNPP09543 421 aaKnown RBP13.6□□□□□ -0.23
SDC1-202ENST00000381150 CHRNB1P11230 501 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 SLC2A4P14672 509 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 TYMPP19971 482 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 SERPINH1P50454 418 aaKnown RBP13.6□□□□□ -0.23
SDC1-202ENST00000381150 NUDT6P53370 316 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 CRY1Q16526 586 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 NKG7Q16617 165 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 FCRL5Q96RD9 977 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 HACD3Q9P035 362 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 GPR45Q9Y5Y3 372 aa13.6□□□□□ -0.23
SDC1-202ENST00000381150 KRT87PA6NCN2 255 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 NPEPPSL1A6NEC2 478 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 FKBP9O95302 570 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ADRA1AP35348 466 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 DSC2Q02487 901 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 PTGR1Q14914 329 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ZNF404Q494X3 552 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 TPRG1LQ5T0D9 272 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 FKBP9P1Q75LS8 142 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 P3H2Q8IVL5 708 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 PAF1Q8N7H5 531 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MINDY2Q8NBR6 621 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CDC26Q8NHZ8 85 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 UBASH3BQ8TF42 649 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MTFMTQ96DP5 389 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 UROC1Q96N76 676 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 NECTIN4Q96NY8 510 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 EMILIN2Q9BXX0 1053 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 TESMINQ9Y4I5 508 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 PCDHB14Q9Y5E9 798 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 N6AMT1Q9Y5N5 214 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 A0A0C4DFX4 3053 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 TTC34A8MYJ7 566 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 UPK1AO00322 258 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 GJB3O75712 270 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CCDC159P0C7I6 412 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 FAM209AQ5JX71 171 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 RFPL4BQ6ZWI9 263 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 CILP2Q8IUL8 1156 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 GALNT12Q8IXK2 581 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ASCC1Q8N9N2 400 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 B3GALT6Q96L58 329 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 BARD1Q99728 777 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 C8orf4Q9NR00 106 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 COQ3Q9NZJ6 369 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MYO16Q9Y6X6 1858 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MATN3O15232 486 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 RGS10O43665 173 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 GUCA1CO95843 209 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 SERPINA1P01009 418 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 SLC2A3P11169 496 aa13.59□□□□□ -0.23
SDC1-202ENST00000381150 MYCLP1P12525 358 aaPredicted RBP13.59□□□□□ -0.23
SDC1-202ENST00000381150 ITIH1P19827 911 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms