RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PPP2R2DQ66LE6 453 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 LCN8Q6JVE9 175 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 TMEM154Q6P9G4 183 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 CYP20A1Q6UW02 462 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 TECPR1Q7Z6L1 1165 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 FAM9CQ8IZT9 166 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 TMEM102Q8N9M5 508 aaPredicted RBP22.62■■□□□ 1.21
VPS16-201ENST00000380443 GLB1L3Q8NCI6 653 aaPredicted RBP22.62■■□□□ 1.21
VPS16-201ENST00000380443 MCOLN3Q8TDD5 553 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 USP7Q93009 1102 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 ZBTB18Q99592 522 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 EBF3Q9H4W6 596 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 ARMC1Q9NVT9 282 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 HCFC2Q9Y5Z7 792 aa22.62■■□□□ 1.21
VPS16-201ENST00000380443 NFATC1O95644 943 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 PIM1P11309 404 aaPredicted RBP22.61■■□□□ 1.21
VPS16-201ENST00000380443 AQP4P55087 323 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 HSPA14Q0VDF9 509 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 INPP5AQ14642 412 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 IL23RQ5VWK5 629 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 RASGRP3Q8IV61 690 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 ING5Q8WYH8 240 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 SMG7Q92540 1137 aaKnown RBP22.61■■□□□ 1.21
VPS16-201ENST00000380443 PKP2Q99959 881 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 C1orf50Q9BV19 199 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 CXorf56Q9H5V9 222 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 CMTM6Q9NX76 183 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 PDP2Q9P2J9 529 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 ANKRD12Q6UB98 2062 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 C16orf96A6NNT2 1141 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 H0Y858 1186 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 MANBAO00462 879 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 DENRO43583 198 aaKnown RBP22.61■■□□□ 1.21
VPS16-201ENST00000380443 PRNPP04156 253 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 GNPDA1P46926 289 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 ZNF33BQ06732 778 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 AASDHQ4L235 1098 aaPredicted RBP22.61■■□□□ 1.21
VPS16-201ENST00000380443 PTRH1Q86Y79 214 aaKnown RBP22.61■■□□□ 1.21
VPS16-201ENST00000380443 LILRA2Q8N149 483 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 DCBLD1Q8N8Z6 715 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 NAT14Q8WUY8 206 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 UCMAQ8WVF2 138 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 BTN2A2Q8WVV5 523 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 TMEM125Q96AQ2 219 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 TEX37Q96LM6 180 aa22.61■■□□□ 1.21
VPS16-201ENST00000380443 KANSL1LA0AUZ9 987 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 SERTM1A2A2V5 107 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 LOC730098B7Z3J9 87 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 RNASEH2AO75792 299 aaKnown RBP22.6■■□□□ 1.21
VPS16-201ENST00000380443 CTSLP07711 333 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 MMP12P39900 470 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 GDF5P43026 501 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 SLC6A12P48065 614 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 CACHD1Q5VU97 1274 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 Q6ZVL8 140 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 SLC39A3Q9BRY0 314 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 ZNF576Q9H609 170 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 IL1RL2Q9HB29 575 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 CD84Q9UIB8 345 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 PLXNA2O75051 1894 aa22.6■■□□□ 1.21
VPS16-201ENST00000380443 ASPDHA6ND91 283 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ANKRD28O15084 1053 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 SLCO2B1O94956 709 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 G6PDP11413 515 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 CBX2Q14781 532 aaPredicted RBP22.59■■□□□ 1.21
VPS16-201ENST00000380443 EIF4HQ15056 248 aaKnown RBP22.59■■□□□ 1.21
VPS16-201ENST00000380443 IMPG1Q17R60 797 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 HID1Q8IV36 788 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 TMIEQ8NEW7 156 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ITFG1Q8TB96 612 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 SORCS1Q8WY21 1168 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 KLQ9UEF7 1012 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ZNF490Q9ULM2 529 aaPredicted RBP22.59■■□□□ 1.21
VPS16-201ENST00000380443 SNX6Q9UNH7 406 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 RNF11Q9Y3C5 154 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 NPIPB8E9PQR5 432 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 SLC2A4P14672 509 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 IL12AP29459 219 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 LRRC73Q5JTD7 316 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 PAGE3Q5JUK9 113 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 CYP2U1Q7Z449 544 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ETFBKMTQ8IXQ9 262 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 BPIFB1Q8TDL5 484 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ELMO1Q92556 727 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 SCAMP4Q969E2 229 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 VPS33AQ96AX1 596 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 RIOK2Q9BVS4 552 aaKnown RBP22.59■■□□□ 1.21
VPS16-201ENST00000380443 EPHX3Q9H6B9 360 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 ACTR8Q9H981 624 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 CCM2LQ9NUG4 571 aaPredicted RBP22.59■■□□□ 1.21
VPS16-201ENST00000380443 OBP2AQ9NY56 170 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 AP3M1Q9Y2T2 418 aa22.59■■□□□ 1.21
VPS16-201ENST00000380443 HNRNPRO43390 633 aaKnown RBP22.58■■□□□ 1.21
VPS16-201ENST00000380443 TULP3O75386 442 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 LYNP07948 512 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 ETV3P41162 512 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 ATXN3P54252 364 aaPredicted RBP22.58■■□□□ 1.21
VPS16-201ENST00000380443 GPM6BQ13491 265 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 RFTN2Q52LD8 501 aaPredicted RBP22.58■■□□□ 1.21
VPS16-201ENST00000380443 LIPIQ6XZB0 460 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms