RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FFAR3O14843 346 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 GPR42O15529 346 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 EPORP19235 508 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PBLDP30039 288 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 TIE1P35590 1138 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PIK3CGP48736 1102 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 SEC13P55735 322 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 AP1S2P56377 157 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 CAMK2GQ13555 558 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 CST6Q15828 149 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PTCHD3Q3KNS1 767 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 ATP6AP1LQ52LC2 224 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PIGGQ5H8A4 983 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 MTSS1LQ765P7 747 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 MYLK4Q86YV6 388 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PYCR2Q96C36 320 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 C1orf50Q9BV19 199 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 AIG1Q9NVV5 245 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 NOP53Q9NZM5 478 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 GULP1Q9UBP9 304 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 SYNCRIPO60506 623 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PSIP1O75475 530 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 GSTM1P09488 218 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 TNFRSF4P43489 277 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 KIR2DL1P43626 348 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC6A12P48065 614 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 IRX1P78414 480 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 GSTM4Q03013 218 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 EZH1Q92800 747 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 GLMNQ92990 594 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 MSLNLQ96KJ4 702 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 ZCCHC2Q9C0B9 1178 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 TRIM39Q9HCM9 518 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 ATXN10Q9UBB4 475 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 PCDHGA7Q9Y5G6 932 aa19.39■□□□□ 0.69
PDLIM5-205ENST00000380180 MRASO14807 208 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 LILRB5O75023 590 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 WDR47O94967 919 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 PDHA2P29803 388 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 BMP8BP34820 402 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 TAS2R38P59533 333 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF423Q2M1K9 1284 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 C2orf27AQ580R0 203 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 LRRC70Q7Z2Q7 622 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 FNDC5Q8NAU1 212 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 PLA2G15Q8NCC3 412 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 CSGALNACT1Q8TDX6 532 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 FOXJ1Q92949 421 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 EBF2Q9HAK2 575 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 KLQ9UEF7 1012 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 TRPS1Q9UHF7 1281 aa19.38■□□□□ 0.69
PDLIM5-205ENST00000380180 ARHGEF33A8MVX0 844 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 C9JVG2 144 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 NR5A2O00482 541 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 LSM1O15116 133 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 RNASEH1O60930 286 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 CLDN9O95484 217 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 THOP1P52888 689 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 PSME3P61289 254 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 GRIK2Q13002 908 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 CEACAM7Q14002 265 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 CCNIQ14094 377 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 VPS26BQ4G0F5 336 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF658BQ4V348 819 aaPredicted RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 BCL7AQ4VC05 210 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 AGBL4Q5VU57 503 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 TRAPPC5Q8IUR0 188 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC22A15Q8IZD6 547 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 KCNV2Q8TDN2 545 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC45A3Q96JT2 553 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 BRINP2Q9C0B6 783 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 ATG10Q9H0Y0 220 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 FARSBQ9NSD9 589 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 STX18Q9P2W9 335 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 CCL27Q9Y4X3 112 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 SPTBN5Q9NRC6 3674 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 IGLON5A6NGN9 336 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 ULK1O75385 1050 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 MAP4P27816 1152 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 MRPL19P49406 292 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 HTR4Q13639 388 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 NR6A1Q15406 480 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 NEK5Q6P3R8 708 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 BLOC1S3Q6QNY0 202 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 LAYNQ6UX15 382 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 CFAP206Q8IYR0 622 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 RNF148Q8N7C7 305 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 TEX37Q96LM6 180 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 ACTR8Q9H981 624 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 SERGEFQ9UGK8 458 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNHIT2Q9UHR6 403 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC22A14Q9Y267 594 aa19.37■□□□□ 0.69
PDLIM5-205ENST00000380180 MYO10Q9HD67 2058 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 NPC1O15118 1278 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 PCDH8O95206 1070 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 CAPN3P20807 821 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 MSX2P35548 267 aaPredicted RBP19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 PTDSS1P48651 473 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms