RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PPP1R3AQ16821 1122 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 UAP1L1Q3KQV9 507 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 CAPRIN2Q6IMN6 1127 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 FRA10AC1Q70Z53 315 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ADAMTSL2Q86TH1 951 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 CNOT10Q9H9A5 744 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 IMP3Q9NV31 184 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 CD274Q9NZQ7 290 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 RAB23Q9ULC3 237 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ASF1AQ9Y294 204 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 LRP4O75096 1905 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 PSIP1O75475 530 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 C8GP07360 202 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 DHRS4L1P0CG22 281 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 MYL2P10916 166 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 MTHFD2P13995 350 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 HNRNPKP61978 463 aaKnown RBP eCLIP13.76□□□□□ -0.218e-13■■■□□ 16.8
HERPUD1-203ENST00000379792 PRKG2Q13237 762 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 PCLAFQ15004 111 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 TGFBIQ15582 683 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 RPE65Q16518 533 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ZYG11AQ6WRX3 759 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 RASGRP3Q8IV61 690 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 C10orf107Q8IVU9 208 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ZNF548Q8NEK5 533 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 RHEBL1Q8TAI7 183 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 PHF21BQ96EK2 531 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 MOCOSQ96EN8 888 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 NRTNQ99748 197 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 SLC12A9Q9BXP2 914 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 IL21RQ9HBE5 538 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 PARVBQ9HBI1 364 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 SPASTQ9UBP0 616 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 OTOGLQ3ZCN5 2332 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 TDRD6O60522 2096 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 AQP9O43315 295 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 PIAS2O75928 621 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 C1orf105O95561 183 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 BPGMP07738 259 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 HOXD12P35452 270 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 MPLP40238 635 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 RPIAP49247 311 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 GUCY1A3Q02108 690 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 ELOCQ15369 112 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 SHBQ15464 509 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 PFKFB4Q16877 469 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 HLA-BQ31612 363 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 LAIR1Q6GTX8 287 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 ABRAXAS1Q6UWZ7 409 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 LMNTD1Q8N9Z9 388 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 CEP76Q8TAP6 659 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 MCOLN3Q8TDD5 553 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 FERD3LQ96RJ6 166 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 ELF4Q99607 663 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 ERVMER34-1Q9H9K5 563 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 CAPN10Q9HC96 672 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 OGFRQ9NZT2 677 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 PLAGL1Q9UM63 463 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 OARD1Q9Y530 152 aa13.75□□□□□ -0.21
HERPUD1-203ENST00000379792 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 A6NCN8 305 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 LRRC14BA6NHZ5 514 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 A8MT66 165 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 B4DGG1 531 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 SLC16A5O15375 505 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 YY2O15391 372 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 FFAR2O15552 330 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 SMIM24O75264 130 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 EPN2O95208 641 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 CATP04040 527 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 NEFHP12036 1026 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 GFAPP14136 432 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 TAC1P20366 129 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 CYP2A7P20853 494 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 MAP4P27816 1152 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 HALP42357 657 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 AGTR2P50052 363 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 KRT33BQ14525 404 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 DEFB133Q30KQ1 61 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 TCEAL6Q6IPX3 200 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 PTGR2Q8N8N7 351 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-203ENST00000379792 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms