RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PLCL1Q15111 1095 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 DHRS13Q6UX07 377 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 TAOK1Q7L7X3 1001 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 TMPRSS12Q86WS5 348 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 VRK3Q8IV63 474 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 GSPT2Q8IYD1 628 aaKnown RBP11.61□□□□□ -0.55
PCNA-201ENST00000379143 CACTIN-AS1Q8N1I8 211 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 TSPAN17Q96FV3 270 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 GFM1Q96RP9 751 aaKnown RBP11.61□□□□□ -0.55
PCNA-201ENST00000379143 GPR22Q99680 433 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 TXLNGYQ9BZA5 131 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 SYTL2Q9HCH5 934 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 GALPQ9UBC7 116 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCNA-201ENST00000379143 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
PCNA-201ENST00000379143 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
PCNA-201ENST00000379143 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 B4GAT1O43505 415 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 UBXN7O94888 489 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 MATN4O95460 622 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CPNE6O95741 557 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 INHBAP08476 426 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 AMD1P17707 334 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CNTFP26441 200 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CD1CP29017 333 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 IL2P60568 153 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CCL7P80098 99 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SHC2P98077 582 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ABRQ12979 859 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ACSBG2Q5FVE4 666 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 N4BP2L1Q5TBK1 243 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 WDR74Q6RFH5 385 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 RBM44Q6ZP01 1051 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAB44Q7Z6P3 723 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 PIM3Q86V86 326 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 DCUN1D3Q8IWE4 304 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CPNE9Q8IYJ1 553 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 PHC3Q8NDX5 983 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 OR5AR1Q8NGP9 310 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 GIMAP7Q8NHV1 300 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 GRAMD1AQ96CP6 724 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SLC30A3Q99726 388 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CCDC77Q9BR77 488 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 TFB2MQ9H5Q4 396 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ZFYVE26Q68DK2 2539 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 EXOC1LA0A1B0GW35 172 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 A0A1W2PQM1 296 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 D6RAR5 112 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 TMX2-CTNND1H3BSU7 103 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 MATN2O00339 956 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CATP04040 527 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 PROS1P07225 676 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ITGA2BP08514 1039 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 STMN1P16949 149 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SAT1P21673 171 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SHMT2P34897 504 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 MSH2P43246 934 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SERPINB9P50453 376 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 TAS2R39P59534 338 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 TIAL1Q01085 375 aaKnown RBP eCLIP11.6□□□□□ -0.559e-27■■■■■ 91.4
PCNA-201ENST00000379143 SLC29A2Q14542 456 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 USP10Q14694 798 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.551e-6■■■□□ 15.4
PCNA-201ENST00000379143 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 AMZ1Q400G9 498 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 MAP9Q49MG5 647 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 LGSNQ5TDP6 509 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 HES3Q5TGS1 186 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CDCP2Q5VXM1 449 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 PAQR3Q6TCH7 311 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 OOSP2Q86WS3 158 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ZNF761Q86XN6 746 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 PLXDC1Q8IUK5 500 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 MYO1HQ8N1T3 1032 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAB42Q8N4Z0 105 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 NKAPQ8N5F7 415 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 CFAP61Q8NHU2 1237 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 SLC44A1Q8WWI5 657 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 LCN9Q8WX39 176 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAD51AP1Q96B01 352 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 PDLIM5Q96HC4 596 aaKnown RBP11.6□□□□□ -0.55
PCNA-201ENST00000379143 TMEM74Q96NL1 305 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 DEPDC7Q96QD5 511 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 OLFM1Q99784 485 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 HGH1Q9BTY7 390 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAB11FIP5Q9BXF6 653 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 TBC1D10AQ9BXI6 508 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAB33BQ9H082 229 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 ZMYND15Q9H091 742 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 FETUBQ9UGM5 382 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 SLC39A10Q9ULF5 831 aa11.6□□□□□ -0.55
PCNA-201ENST00000379143 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms