RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HADHAP40939 763 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 TPM4P67936 248 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 MPP3Q13368 585 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 OLIG2Q13516 323 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 IQCB1Q15051 598 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 MICALCLQ6ZW33 695 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 BZW1Q7L1Q6 419 aaKnown RBP17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 AMIGO1Q86WK6 493 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 ZNF655Q8N720 491 aaPredicted RBP17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 C19orf47Q8N9M1 422 aaKnown RBP17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 FCRL5Q96RD9 977 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 PITPNM3Q9BZ71 974 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 COG4Q9H9E3 785 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 FAM60AQ9NP50 221 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 AGPAT4Q9NRZ5 378 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 CNTRLQ7Z7A1 2325 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 POLEQ07864 2286 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 ANKRD12Q6UB98 2062 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 C2orf81A6NN90 581 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 CCL22O00626 93 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 HCRTR1O43613 425 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 SPOPO43791 374 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 CTSBP07858 339 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 PYGMP11217 842 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 PDHA2P29803 388 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 NR2C2P49116 596 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 PRLHRP49683 370 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 SPESP1Q6UW49 350 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 ST6GALNAC3Q8NDV1 305 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 OR13C4Q8NGS5 318 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 GBP5Q96PP8 586 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 C17orf62Q9BQA9 187 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 C10orf88Q9H8K7 445 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 TXLNGQ9NUQ3 528 aa17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
PDLIM4-202ENST00000379018 KLHL33A6NCF5 533 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 CFAP99D6REC4 459 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 AKR1B10O60218 316 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 IPO13O94829 963 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 IGHEP01854 428 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 PRF1P14222 555 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 ELAVL4P26378 380 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 CDKN2BP42772 138 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 DCDP81605 110 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 TFDP2Q14188 446 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 TAF1AQ15573 450 aaPredicted RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 IGFL3Q6UXB1 125 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 Q6ZS92 163 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 PPP1R32Q7Z5V6 425 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 ADGRF3Q8IZF5 1079 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 OR2Y1Q8NGV0 311 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 P3H4Q92791 437 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 COPS8Q99627 209 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 WDR77Q9BQA1 342 aaPredicted RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 OR52A5Q9H2C5 316 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 ATP13A2Q9NQ11 1180 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 NOVA2Q9UNW9 492 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 DOCK10Q96BY6 2186 aa17.18■□□□□ 0.34
PDLIM4-202ENST00000379018 SNRNP200O75643 2136 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ZSCAN9O15535 394 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 HNRNPRO43390 633 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 KLHL41O60662 606 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ZG16O60844 167 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 MSL3P1P0C860 447 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ATP1B2P14415 290 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 UGT2B7P16662 529 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ITGALP20701 1170 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 PER3P56645 1201 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ZIC1Q15915 447 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 CRB2Q5IJ48 1285 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 CCDC50Q8IVM0 306 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 NXPE1Q8N323 547 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ULK4Q96C45 1275 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 IQCDQ96DY2 449 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 UNKQ9C0B0 810 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 TFB2MQ9H5Q4 396 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 MVB12BQ9H7P6 319 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 SPTLC3Q9NUV7 552 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 IFNKQ9P0W0 207 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 ICKQ9UPZ9 632 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 AP1M2Q9Y6Q5 423 aa17.17■□□□□ 0.34
PDLIM4-202ENST00000379018 UMODP07911 640 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 COMTP21964 271 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 GEMP55040 296 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 XIAPP98170 497 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 CDC16Q13042 620 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 BRD3Q15059 726 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 NKAIN1Q4KMZ8 207 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 RHBDD2Q6NTF9 364 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 KCNMB4Q86W47 210 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms