RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF18-202ENST00000378572 PILRAQ9UKJ1 303 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 TERTO14746 1132 aaKnown RBP13.45□□□□□ -0.26
PRPF18-202ENST00000378572 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CDH16O75309 829 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 MTX2O75431 263 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CRTAMO95727 393 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 PAMP19021 973 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 NMBRP28336 390 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 PDE1BQ01064 536 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TLE1Q04724 770 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CDC20Q12834 499 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TAF1AQ15573 450 aaPredicted RBP13.45□□□□□ -0.26
PRPF18-202ENST00000378572 DEFB109BQ30KR1 87 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 ARHGAP22Q7Z5H3 698 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 LRRTM4Q86VH4 590 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 STYXQ8WUJ0 223 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CDKL2Q92772 493 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CXorf40BQ96DE9 158 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 MFSD3Q96ES6 412 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 CERS2Q96G23 380 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 ELMO2Q96JJ3 720 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 PLEKHG4BQ96PX9 1271 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
PRPF18-202ENST00000378572 DHRS4Q9BTZ2 278 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 TRIM39Q9HCM9 518 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 PDP2Q9P2J9 529 aa13.45□□□□□ -0.26
PRPF18-202ENST00000378572 LOC101059948A0A1B0GTJ6 334 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 A6NCN8 305 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 LILRA5A6NI73 299 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 KMOO15229 486 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 UBXN7O94888 489 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 MGAT5Q09328 741 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SEPT6Q14141 434 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 KBTBD12Q3ZCT8 623 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 PDPK2PQ6A1A2 396 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ADGRG6Q86SQ4 1221 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 C9orf43Q8TAL5 461 aaPredicted RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 BLOC1S5Q8TDH9 187 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 STARD8Q92502 1023 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 PGM2Q96G03 612 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SLC45A3Q96JT2 553 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF778Q96MU6 729 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TRIT1Q9H3H1 467 aaKnown RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 BPIFA1Q9NP55 256 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF71Q9NQZ8 489 aaPredicted RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 FBXO8Q9NRD0 319 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 EURLQ9NYK6 297 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SPO11Q9Y5K1 396 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 GPR89AB7ZAQ6 455 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 GPR89BP0CG08 455 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF7P17097 686 aaPredicted RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 VCLP18206 1134 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TCN2P20062 427 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 DCDC1P59894 354 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 UBE2IP63279 158 aaKnown RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 MC1RQ01726 317 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ABHD18Q0P651 414 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 LONRF1Q17RB8 773 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 HSP90B2PQ58FF3 399 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 CES3Q6UWW8 571 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TMEM26Q6ZUK4 368 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 GLT6D1Q7Z4J2 308 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 LRRC6Q86X45 466 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 RASGRP3Q8IV61 690 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 TTC30BQ8N4P2 665 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ESX1Q8N693 406 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SLC44A1Q8WWI5 657 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 SCHIP1Q9P0W5 487 aaPredicted RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 LGALS13Q9UHV8 139 aa13.44□□□□□ -0.26
PRPF18-202ENST00000378572 MN1Q10571 1320 aaPredicted RBP13.44□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 HECTD1Q9ULT8 2610 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 C2orf81A6NN90 581 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 CDK14O94921 469 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 LPOP22079 712 aaPredicted RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 GCAP28676 217 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 ARCN1P48444 511 aaKnown RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
PRPF18-202ENST00000378572 ATP1A1-AS1Q5TC04 95 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 AGBL2Q5U5Z8 902 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 IRGCQ6NXR0 463 aa13.43□□□□□ -0.26
PRPF18-202ENST00000378572 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms