RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 WDR20Q8TBZ3 569 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 SEMA4DQ92854 862 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 SECISBP2LQ93073 1101 aaKnown RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 ZMAT2Q96NC0 199 aaKnown RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 DGAT2Q96PD7 388 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 EGFL8Q99944 293 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 CDK19Q9BWU1 502 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 TMEM39BQ9GZU3 492 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 OR10A4Q9H209 315 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 PPIL3Q9H2H8 161 aaKnown RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 MBNL1Q9NR56 388 aaKnown RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 TAS2R14Q9NYV8 317 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 BCCIPQ9P287 314 aaKnown RBP eCLIP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 C5AR2Q9P296 337 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 TSPYL4Q9UJ04 414 aa2.01□□□□□ -2.09
VPS13A-206ENST00000376646 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF644Q9H582 1327 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-206ENST00000376646 TMEM8BA6NDV4 472 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 URADA6NGE7 173 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 H7C0S8 307 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TMEM189-UBE2V1I3L0A0 370 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 J3QR06 171 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ZBTB43O43298 467 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TBX10O75333 385 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TPOP07202 933 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 CEACAM1P13688 526 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 CPT2P23786 658 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 DNASE1P24855 282 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 HRH2P25021 359 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MATR3P43243 847 aaKnown RBP eCLIP2□□□□□ -2.09
VPS13A-206ENST00000376646 UBE2V1Q13404 147 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 SNTB1Q13884 538 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 LETM2Q2VYF4 491 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 FAM98BQ52LJ0 330 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 FAM47EQ6ZV65 393 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 INTS8Q75QN2 995 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 GUF1Q8N442 669 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 FBXO39Q8N4B4 442 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 EMC1Q8N766 993 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TDRD5Q8NAT2 981 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 LPGAT1Q92604 370 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 PRAC1Q96KF2 57 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 GFI1Q99684 422 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 HGH1Q9BTY7 390 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ANKRD2Q9GZV1 360 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 SPATC1LQ9H0A9 340 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 KCNK15Q9H427 330 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 GOLPH3LQ9H4A5 285 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 RABEP2Q9H5N1 569 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 DENND2DQ9H6A0 471 aaPredicted RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 CHMP1AQ9HD42 196 aaPredicted RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 SIX2Q9NPC8 291 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 STK36Q9NRP7 1315 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ADPRHL2Q9NX46 363 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 GDE1Q9NZC3 331 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 PAK5Q9P286 719 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 LARSQ9P2J5 1176 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 RASAL2Q9UJF2 1139 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ANAPC2Q9UJX6 822 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ZHX1Q9UKY1 873 aaPredicted RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 SMAD5-AS1Q9Y6J3 95 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 A0A0G2JLW4 131 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MAGEB17A8MXT2 336 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 CLIC2O15247 247 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 DIAPH2O60879 1101 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF217O75362 1048 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TADA2AO75478 443 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 BMP10O95393 424 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 GGPS1O95749 300 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 NGFP01138 241 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 RNF224P0DH78 156 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MYBL1P10243 752 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 KRT5P13647 590 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 EPHA2P29317 976 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 KRT2P35908 639 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 NKX2-1P43699 371 aaPredicted RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 LMO4P61968 165 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 IL11RAQ14626 422 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 PSMD6Q15008 389 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 C6orf163Q5TEZ5 329 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TEX38Q6PEX7 206 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 BHLHB9Q6PI77 547 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MFSD6Q6ZSS7 791 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 HAUS6Q7Z4H7 955 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 PM20D2Q8IYS1 436 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 SLC5A8Q8N695 610 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 Q8NFD4 153 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 OR6J1Q8NGC5 347 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 TBC1D16Q8TBP0 767 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ZFAND2BQ8WV99 257 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 VPS33AQ96AX1 596 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 ABHD8Q96I13 439 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MRPL1Q9BYD6 325 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 SEMA6AQ9H2E6 1030 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 MMP27Q9H306 513 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 APOBEC3GQ9HC16 384 aaKnown RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 HAO2Q9NYQ3 351 aa2□□□□□ -2.09
VPS13A-206ENST00000376646 CRNNQ9UBG3 495 aaPredicted RBP2□□□□□ -2.09
VPS13A-206ENST00000376646 H0YIN7 160 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 PLK4O00444 970 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms